Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064230m |
Family | GH17 |
Protein Properties | Length: 473 Molecular Weight: 48271.1 Isoelectric Point: 4.6038 |
Chromosome | Chromosome/Scaffold: 022049 Start: 4473 End: 6430 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 336 | 0 |
IGVNYGTKGDNLPPPAKVASFLANRTRIDRVKLFDANADMVRAFAGTGIALVVTAANGDIPRLATRDGAAAWVSANVAPYYPATDISLVAVGNEIMATAD KSLISNLVPAMRALRAALVAAGFPRIRVSTPHSLGILSVSEQPSASRFRDGFDRAVRGRAFMVNPYPYFGYTGGTLAYALARQPNAGVADPGTGITYTSM LEAQLDAVFSAMKRLGFGDVEIAVGETGWPSKAEDGQAGVSAAEAAEYNRYLIGEAGGGSGTPLMPRRTFETYIFSLFNENLKPGPIAERNFGLFQPDLT PVYDV |
Full Sequence |
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Protein Sequence Length: 473 Download |
MAPPSRQERH ASAAVLSAFL LLVAPPYYAT AIGVNYGTKG DNLPPPAKVA SFLANRTRID 60 RVKLFDANAD MVRAFAGTGI ALVVTAANGD IPRLATRDGA AAWVSANVAP YYPATDISLV 120 AVGNEIMATA DKSLISNLVP AMRALRAALV AAGFPRIRVS TPHSLGILSV SEQPSASRFR 180 DGFDRAVRGR AFMVNPYPYF GYTGGTLAYA LARQPNAGVA DPGTGITYTS MLEAQLDAVF 240 SAMKRLGFGD VEIAVGETGW PSKAEDGQAG VSAAEAAEYN RYLIGEAGGG SGTPLMPRRT 300 FETYIFSLFN ENLKPGPIAE RNFGLFQPDL TPVYDVGLMK DGGETSPAPA PAATQTSAEE 360 AGAPESSKAA KKRDAEAAAP AETTAASAPA PAPASGDDDA AGPSPAGAPA AEGGSTAGDD 420 KTTDGGDGEG STEKNPETSP APDGAAASAA ADLLVPIVSS MLTAALFLAF HM* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-73 | 32 | 336 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ03332.1 | 0 | 1 | 466 | 1 | 494 | hypothetical protein OsI_25474 [Oryza sativa Indica Group] |
RefSeq | NP_001059262.1 | 0 | 1 | 466 | 1 | 494 | Os07g0240200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151227.1 | 0 | 35 | 470 | 33 | 494 | glucan endo-1,3-beta-glucosidase [Zea mays] |
RefSeq | XP_002283647.1 | 0 | 29 | 349 | 25 | 354 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002459582.1 | 0 | 30 | 466 | 32 | 537 | hypothetical protein SORBIDRAFT_02g007050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 32 | 336 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 336 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 32 | 338 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 338 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 32 | 338 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |