Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064389m |
Family | GH100 |
Protein Properties | Length: 552 Molecular Weight: 62870.3 Isoelectric Point: 6.6441 |
Chromosome | Chromosome/Scaffold: 022111 Start: 776 End: 4371 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 83 | 537 | 0 |
HPLVNEAWEALRKSVVYFRGQPVGTIAALDHASEEVLNYDQVFVRDFVPSALAFLMNNETDIVKNFLLKTLHLQSSEKMVDRFKLGAGAMPASFKVDRNK NRNTETLVADFGESAIGRVAPVDSGFWWIILLRAYTKYTGDVSLAESPDCQKCMRLILNLCLSEGFDTFPTLLCTDGCSMIDRRMGIYGYPIEIQALFYM ALRCALQMLKPEGEGKEFIEKIGQRLHALTYHMRNYFWLDFHQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPCRGGYFLGNVSPAMMDFRWFA LGNCIAIVSSLATPEQSVAIMDLIEERWDELVGEMPLKICYPAIENHEWRIITGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQMAKRAIELAESR LLKDGWPEYYDGKLGRFVGKQARKFQTWSIAGYLVARMMLEDPSTLMMISMEEDR |
Full Sequence |
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Protein Sequence Length: 552 Download |
MKRVSSHVSL ASEAEINLDL SRLIIDKPRF ALERKRSFDE QSWSELSHRQ NDGFDSVLQS 60 PAFPSGGFDS PFSMGTHFGG GPHPLVNEAW EALRKSVVYF RGQPVGTIAA LDHASEEVLN 120 YDQVFVRDFV PSALAFLMNN ETDIVKNFLL KTLHLQSSEK MVDRFKLGAG AMPASFKVDR 180 NKNRNTETLV ADFGESAIGR VAPVDSGFWW IILLRAYTKY TGDVSLAESP DCQKCMRLIL 240 NLCLSEGFDT FPTLLCTDGC SMIDRRMGIY GYPIEIQALF YMALRCALQM LKPEGEGKEF 300 IEKIGQRLHA LTYHMRNYFW LDFHQLNNIY RYKTEEYSHT AVNKFNVIPD SIPDWVFDFM 360 PCRGGYFLGN VSPAMMDFRW FALGNCIAIV SSLATPEQSV AIMDLIEERW DELVGEMPLK 420 ICYPAIENHE WRIITGCDPK NTRWSYHNGG SWPVLLWLLT AACIKTGRPQ MAKRAIELAE 480 SRLLKDGWPE YYDGKLGRFV GKQARKFQTW SIAGYLVARM MLEDPSTLMM ISMEEDRPVK 540 PTMRRSASWN A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.001 | 445 | 520 | 80 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 1 | 549 | 552 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 88 | 525 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02973 | PLN02973 | 0 | 17 | 549 | 545 | + beta-fructofuranosidase | ||
PLN02703 | PLN02703 | 0 | 29 | 536 | 516 | + beta-fructofuranosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004135 | amylo-alpha-1,6-glucosidase activity |
GO:0005978 | glycogen biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAL26914.1 | 0 | 1 | 551 | 1 | 552 | alkaline invertase [Triticum aestivum] |
GenBank | EEC80505.1 | 0 | 1 | 551 | 1 | 512 | hypothetical protein OsI_22763 [Oryza sativa Indica Group] |
RefSeq | NP_001065878.1 | 0 | 1 | 551 | 1 | 548 | Os11g0175400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146670.1 | 0 | 1 | 551 | 1 | 550 | hypothetical protein LOC100280270 [Zea mays] |
RefSeq | XP_002450402.1 | 0 | 1 | 551 | 1 | 558 | hypothetical protein SORBIDRAFT_05g004770 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES848839 | 358 | 185 | 541 | 0 |
ES809234 | 324 | 212 | 535 | 0 |
HO466454 | 458 | 85 | 539 | 0 |
CK269009 | 329 | 222 | 550 | 0 |
CK371396 | 286 | 267 | 552 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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