| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00064435m |
| Family | GH37 |
| Protein Properties | Length: 455 Molecular Weight: 51215.7 Isoelectric Point: 6.4548 |
| Chromosome | Chromosome/Scaffold: 022909 Start: 4378 End: 8653 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH37 | 7 | 429 | 0 |
| VEDRPDRHTLLPLPGGVVVPGSRFREVYYWDSYWVVRGLMVSKMYDTAKHVVLNLVYLVEKYGFVLNGARSYYTNRSEPPLLSSMVLEVYRATGDVEFVK RAFQFLLKEHSFWMSEIHNVAIRDNHGQVHNLSRYQARWNKPRPESATIDEELASSIDSIADKEKLYHQIASTAESGWDFSSRWMRNSTDMTTLATIYII PVDLNTFIFKMEQDIAAFAKIIGENAISEKFLDASKARHIAIDSILWNSEMEQWLDYWLPTDGDSQQGVYQWKSDSQNRKIFASNFFPLWLNAYHSGSAK FADTAKSERVMASLQKSGLLCAAGIATSLTNTSQQWDFPNGWAPVQHLIAEGLLHSGSEEAVKLAEDIATRWVRTNYAAYKATGAMHEKYDVEACGKSGG GGEYKPQTGFGWSNGVVLSFLEE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 455 Download |
| RRVAPGVEDR PDRHTLLPLP GGVVVPGSRF REVYYWDSYW VVRGLMVSKM YDTAKHVVLN 60 LVYLVEKYGF VLNGARSYYT NRSEPPLLSS MVLEVYRATG DVEFVKRAFQ FLLKEHSFWM 120 SEIHNVAIRD NHGQVHNLSR YQARWNKPRP ESATIDEELA SSIDSIADKE KLYHQIASTA 180 ESGWDFSSRW MRNSTDMTTL ATIYIIPVDL NTFIFKMEQD IAAFAKIIGE NAISEKFLDA 240 SKARHIAIDS ILWNSEMEQW LDYWLPTDGD SQQGVYQWKS DSQNRKIFAS NFFPLWLNAY 300 HSGSAKFADT AKSERVMASL QKSGLLCAAG IATSLTNTSQ QWDFPNGWAP VQHLIAEGLL 360 HSGSEEAVKL AEDIATRWVR TNYAAYKATG AMHEKYDVEA CGKSGGGGEY KPQTGFGWSN 420 GVVLSFLEEF GWPKHKEIGC SRQGEVGLAE AQSG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 1.0e-73 | 29 | 433 | 417 | + trehalase; Provisional | ||
| PRK13271 | treA | 7.0e-81 | 29 | 428 | 408 | + trehalase; Provisional | ||
| COG1626 | TreA | 5.0e-90 | 29 | 431 | 414 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 1 | 440 | 440 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 1 | 431 | 437 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47896.1 | 0 | 1 | 414 | 126 | 537 | Trehalase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAZ16710.1 | 0 | 1 | 413 | 58 | 447 | hypothetical protein OsJ_32186 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065087.1 | 0 | 1 | 440 | 126 | 563 | Os10g0521000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002263698.1 | 0 | 1 | 440 | 131 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002465049.1 | 0 | 1 | 441 | 161 | 579 | hypothetical protein SORBIDRAFT_01g031280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 15 | 428 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2wyn_C | 0 | 15 | 428 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2wyn_B | 0 | 15 | 428 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2wyn_A | 0 | 15 | 428 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2jjb_D | 0 | 15 | 428 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose degradation II (trehalase) | TREHALA-RXN | EC-3.2.1.28 | α,α-trehalase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| JG945740 | 280 | 102 | 381 | 0 |
| JG944203 | 266 | 188 | 453 | 0 |
| JK575328 | 241 | 157 | 397 | 0 |
| GR879062 | 237 | 219 | 455 | 0 |
| JG877869 | 236 | 220 | 455 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |