| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00064436m |
| Family | GH37 |
| Protein Properties | Length: 449 Molecular Weight: 50654.1 Isoelectric Point: 6.3294 |
| Chromosome | Chromosome/Scaffold: 022909 Start: 4378 End: 8653 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH37 | 7 | 423 | 0 |
| VEDRPDRHTLLPLPGGVVVPGSRFREVYYWDSYWVVRGLMVSKMYDTAKHVVLNLVYLVEKYGFVLNGARSYYTNRSEPPLLSSMVLEVYRATGDVEFVK RAFQFLLKEHSFWMSEIHNVAIRDNHGQVHNLSRYQARWNKPRPESATIDEELASSIDSIADKEKLYHQIASTAESGWDFSSRWMRNSTDMTTLATIYII PVDLNTFIFKMEQDIAAFAKIIGENAISEKFLDASKARHIAIDSILWNSEMEQWLDYWLPTDGDSQQGVYQWKSDSQNRKIFASNFFPLWLNAYHSDTAK SERVMASLQKSGLLCAAGIATSLTNTSQQWDFPNGWAPVQHLIAEGLLHSGSEEAVKLAEDIATRWVRTNYAAYKATGAMHEKYDVEACGKSGGGGEYKP QTGFGWSNGVVLSFLEE | |||
| Full Sequence |
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| Protein Sequence Length: 449 Download |
| RRVAPGVEDR PDRHTLLPLP GGVVVPGSRF REVYYWDSYW VVRGLMVSKM YDTAKHVVLN 60 LVYLVEKYGF VLNGARSYYT NRSEPPLLSS MVLEVYRATG DVEFVKRAFQ FLLKEHSFWM 120 SEIHNVAIRD NHGQVHNLSR YQARWNKPRP ESATIDEELA SSIDSIADKE KLYHQIASTA 180 ESGWDFSSRW MRNSTDMTTL ATIYIIPVDL NTFIFKMEQD IAAFAKIIGE NAISEKFLDA 240 SKARHIAIDS ILWNSEMEQW LDYWLPTDGD SQQGVYQWKS DSQNRKIFAS NFFPLWLNAY 300 HSDTAKSERV MASLQKSGLL CAAGIATSLT NTSQQWDFPN GWAPVQHLIA EGLLHSGSEE 360 AVKLAEDIAT RWVRTNYAAY KATGAMHEKY DVEACGKSGG GGEYKPQTGF GWSNGVVLSF 420 LEEFGWPKHK EIGCSRQGEV GLAEAQSG* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 7.0e-74 | 29 | 427 | 410 | + trehalase; Provisional | ||
| PRK13271 | treA | 7.0e-83 | 29 | 422 | 400 | + trehalase; Provisional | ||
| COG1626 | TreA | 1.0e-90 | 29 | 425 | 407 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 1 | 434 | 434 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 1 | 425 | 432 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0004573 | mannosyl-oligosaccharide glucosidase activity |
| GO:0005991 | trehalose metabolic process |
| GO:0009311 | oligosaccharide metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47896.1 | 0 | 1 | 408 | 126 | 537 | Trehalase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAZ16710.1 | 0 | 1 | 407 | 58 | 447 | hypothetical protein OsJ_32186 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065087.1 | 0 | 1 | 434 | 126 | 563 | Os10g0521000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002263698.1 | 0 | 1 | 434 | 131 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002465049.1 | 0 | 1 | 435 | 161 | 579 | hypothetical protein SORBIDRAFT_01g031280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 15 | 422 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2wyn_C | 0 | 15 | 422 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2wyn_B | 0 | 15 | 422 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2wyn_A | 0 | 15 | 422 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 2jjb_D | 0 | 15 | 422 | 108 | 500 | A Chain A, Golgi Alpha-Mannosidase Ii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose degradation II (trehalase) | TREHALA-RXN | EC-3.2.1.28 | α,α-trehalase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG945740 | 274 | 102 | 375 | 0 |
| JG944203 | 266 | 188 | 447 | 0 |
| JK575328 | 241 | 157 | 391 | 0 |
| GR879062 | 237 | 219 | 449 | 0 |
| JG877869 | 236 | 220 | 449 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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