Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00064504m |
Family | GH9 |
Protein Properties | Length: 436 Molecular Weight: 47369.9 Isoelectric Point: 9.5554 |
Chromosome | Chromosome/Scaffold: 0122579 Start: 8 End: 1709 |
Description | glycosyl hydrolase 9B13 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH9 | 34 | 429 | 0 |
DYRDALTKSILFFEGQRSGRLPPSQRMSWRRDSGLKDGASATVDLVGGYHDAGDNVKFGFPMAFSMTMLAWSVVEFGGLMKAELQHAREAVRWGADYLLK ATAHPDTIYVQVGDATKDHACWERPEDMDTPRTVYKVDPGTPGSDVAAETAAALAAASLVFRKSDPAYASRLLARAKRVFAFADRHRGSYSTGLAADVCP YYCSYSGYQDELLWGAAWLHRATRSPAYLSYIQANGQVLGAGEADNTFGWDNKHAGARVLIAKAFLVQRLGALREYKAHADAFVCSMVPGTPTDQTQYTR GGLLFKLSDSNMQYVTSSAFLLLTYAKYLAFARQTVSCGGGGAVTPQRLRAIARRQVDYLLGSNPAGMSYMVGYGARYPRRVHHRASSLPSVAAHP |
Full Sequence |
---|
Protein Sequence Length: 436 Download |
MARLRCVLVL ALLLAQLPGD AIAGRGHHGP AAHDYRDALT KSILFFEGQR SGRLPPSQRM 60 SWRRDSGLKD GASATVDLVG GYHDAGDNVK FGFPMAFSMT MLAWSVVEFG GLMKAELQHA 120 REAVRWGADY LLKATAHPDT IYVQVGDATK DHACWERPED MDTPRTVYKV DPGTPGSDVA 180 AETAAALAAA SLVFRKSDPA YASRLLARAK RVFAFADRHR GSYSTGLAAD VCPYYCSYSG 240 YQDELLWGAA WLHRATRSPA YLSYIQANGQ VLGAGEADNT FGWDNKHAGA RVLIAKAFLV 300 QRLGALREYK AHADAFVCSM VPGTPTDQTQ YTRGGLLFKL SDSNMQYVTS SAFLLLTYAK 360 YLAFARQTVS CGGGGAVTPQ RLRAIARRQV DYLLGSNPAG MSYMVGYGAR YPRRVHHRAS 420 SLPSVAAHPG RIGCSQ |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 2.0e-166 | 22 | 434 | 416 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-178 | 34 | 421 | 394 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 1.0e-179 | 31 | 436 | 409 | + cellulase | ||
PLN02266 | PLN02266 | 0 | 20 | 436 | 417 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 31 | 434 | 404 | + endoglucanase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN25528.1 | 0 | 1 | 436 | 1 | 438 | unknown [Zea mays] |
RefSeq | NP_001042867.1 | 0 | 1 | 436 | 35 | 470 | Os01g0312800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151458.1 | 0 | 1 | 436 | 1 | 438 | endoglucanase 1 [Zea mays] |
Swiss-Prot | Q8LQ92 | 0 | 1 | 436 | 1 | 436 | GUN3_ORYSJ RecName: Full=Endoglucanase 3; AltName: Full=Endo-1,4-beta glucanase 3; AltName: Full=OsGLU8; Flags: Precursor |
RefSeq | XP_002455539.1 | 0 | 1 | 436 | 1 | 438 | hypothetical protein SORBIDRAFT_03g012840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4tf4_B | 0 | 32 | 420 | 3 | 380 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 4tf4_A | 0 | 32 | 420 | 3 | 380 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3tf4_B | 0 | 32 | 420 | 3 | 380 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3tf4_A | 0 | 32 | 420 | 3 | 380 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 1tf4_B | 0 | 32 | 420 | 3 | 380 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |