Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064613m |
Family | AA6 |
Protein Properties | Length: 197 Molecular Weight: 20727.6 Isoelectric Point: 6.3552 |
Chromosome | Chromosome/Scaffold: 0118585 Start: 2199 End: 3296 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 1 | 189 | 0 |
FYSTYGHVAKLAEEIKKGAASVEGVEVKIWQVPEILSDEVLGKMGAPPKTDAPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGK PAGIFYSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAKMFGMDSVQGGSPYGAGTFAGDGSRWPTEVELEHAFHQGKYFAGIAK |
Full Sequence |
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Protein Sequence Length: 197 Download |
FYSTYGHVAK LAEEIKKGAA SVEGVEVKIW QVPEILSDEV LGKMGAPPKT DAPVITPQEL 60 AEADGILFGF PTRFGMMAAQ MKAFFDATGG LWREQSLAGK PAGIFYSTGT QGGGQETTPL 120 TAVTQLTHHG MVFVPVGYTF GAKMFGMDSV QGGSPYGAGT FAGDGSRWPT EVELEHAFHQ 180 GKYFAGIAKR LKGGSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 8.0e-8 | 1 | 105 | 117 | + Flavodoxin. | ||
pfam03358 | FMN_red | 8.0e-14 | 9 | 138 | 134 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 1.0e-37 | 2 | 193 | 199 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 2.0e-58 | 1 | 191 | 192 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 2.0e-72 | 1 | 193 | 194 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
GO:0050662 | coenzyme binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86423.1 | 0 | 1 | 195 | 9 | 203 | unknown [Zea mays] |
GenBank | EAY76084.1 | 0 | 1 | 195 | 9 | 203 | hypothetical protein OsI_04011 [Oryza sativa Indica Group] |
RefSeq | NP_001044464.1 | 0 | 1 | 195 | 9 | 203 | Os01g0784800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001055969.1 | 0 | 1 | 196 | 9 | 204 | Os05g0501300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149575.1 | 0 | 1 | 195 | 9 | 203 | LOC100283201 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0 | 1 | 193 | 7 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0 | 1 | 193 | 7 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0 | 1 | 193 | 8 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0 | 1 | 193 | 8 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0 | 1 | 193 | 8 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL947335 | 197 | 1 | 197 | 0 |
FL877785 | 197 | 1 | 197 | 0 |
FE615155 | 197 | 1 | 197 | 0 |
FL715309 | 197 | 1 | 197 | 0 |
FL691993 | 189 | 1 | 189 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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