y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064656m |
Family | GT90 |
Protein Properties | Length: 255 Molecular Weight: 28873.6 Isoelectric Point: 5.0205 |
Chromosome | Chromosome/Scaffold: 011827 Start: 10174 End: 11803 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 2 | 207 | 0 |
HFDIPFPDWSFWGWPETNIEPWSREFKSIKVGAKATKWADRVPTAYWKGNPDVASPLRLALLGCNDTNLWRAEIMRQNWTDEANAGYQHSKLSTQCTHRY KIYAEGFAWSVSLKYILSCGSMALLIEPQYEDFFSRGLDPRVNHWPVSRGPGMCDSIRDAVDWGNANPAEAERVGRRGQRLMQDLRMAAVYDYMLHLLTE YAALMD |
Full Sequence |
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Protein Sequence Length: 255 Download |
DHFDIPFPDW SFWGWPETNI EPWSREFKSI KVGAKATKWA DRVPTAYWKG NPDVASPLRL 60 ALLGCNDTNL WRAEIMRQNW TDEANAGYQH SKLSTQCTHR YKIYAEGFAW SVSLKYILSC 120 GSMALLIEPQ YEDFFSRGLD PRVNHWPVSR GPGMCDSIRD AVDWGNANPA EAERVGRRGQ 180 RLMQDLRMAA VYDYMLHLLT EYAALMDFRP APPPTAQEAC EGSVLCLADD KQRRFLEASA 240 AEPAAEEPCV LPPE* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 5.0e-17 | 165 | 236 | 73 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 2.0e-24 | 1 | 64 | 64 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 1.0e-76 | 2 | 208 | 216 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85344.1 | 0 | 1 | 253 | 180 | 434 | unknown [Zea mays] |
GenBank | ACF87853.1 | 0 | 1 | 253 | 225 | 479 | unknown [Zea mays] |
RefSeq | NP_001054658.1 | 0 | 1 | 254 | 33 | 293 | Os05g0149500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151574.1 | 0 | 1 | 253 | 225 | 479 | lipopolysaccharide-modifying protein [Zea mays] |
RefSeq | XP_002439287.1 | 0 | 1 | 251 | 234 | 492 | hypothetical protein SORBIDRAFT_09g003810 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL750643 | 190 | 47 | 236 | 0 |
FL799000 | 182 | 55 | 236 | 0 |
DY233055 | 208 | 32 | 236 | 0 |
DR831026 | 204 | 36 | 236 | 0 |
EE159412 | 191 | 49 | 236 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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