y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064801m |
Family | GH1 |
Protein Properties | Length: 542 Molecular Weight: 62075.3 Isoelectric Point: 6.8201 |
Chromosome | Chromosome/Scaffold: 011815 Start: 1069 End: 4636 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 50 | 514 | 0 |
WFHHGFVFGAATSAYQIEGAWNEHGKGPSTWDHFCHKYPAVYVVYVPTIRCTFSEDVKMLKEMGMDAYRFSISWPRNCQGTLEGDINYKGINYYKNLINK LKENGIEPYVTIFHWDTPQALEDKYGGFLNPRIIKDYTDFAKVCFDHFGDKVKQWFTFNEPHIFCSFAYGTGEYAPGRCSPNRNCAIPCGDSLNEPYLVG HNILLAHAEVVDLYKTYYKGEDGHIGMALDVMFYEPYTKTFLDEQAQARSIDYNLGWFMEPVFRGDYPFSMRSLLRDRLPYFKDEEKAKLVGSYDMMGLN YYTSRFSEHIDISPRFTPVPNTEEAYAREKMSGHDGNPIGLDTGIDWIKSHPKGLKDLLMIIKERYGNPPIYITENGTADVDNGNLSKSDALDDSIRLDY LQRHISAIKKSIDLGADVCGHFTWSLLDSFEWASGYTAHFGLIYVDRNDGFKGYMKKSAKWFKEF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MALLASALMS RSTHLGLRSH IGPNGDNLSW RLPSTEKKHL MPWEIPRRHW FHHGFVFGAA 60 TSAYQIEGAW NEHGKGPSTW DHFCHKYPAV YVVYVPTIRC TFSEDVKMLK EMGMDAYRFS 120 ISWPRNCQGT LEGDINYKGI NYYKNLINKL KENGIEPYVT IFHWDTPQAL EDKYGGFLNP 180 RIIKDYTDFA KVCFDHFGDK VKQWFTFNEP HIFCSFAYGT GEYAPGRCSP NRNCAIPCGD 240 SLNEPYLVGH NILLAHAEVV DLYKTYYKGE DGHIGMALDV MFYEPYTKTF LDEQAQARSI 300 DYNLGWFMEP VFRGDYPFSM RSLLRDRLPY FKDEEKAKLV GSYDMMGLNY YTSRFSEHID 360 ISPRFTPVPN TEEAYAREKM SGHDGNPIGL DTGIDWIKSH PKGLKDLLMI IKERYGNPPI 420 YITENGTADV DNGNLSKSDA LDDSIRLDYL QRHISAIKKS IDLGADVCGH FTWSLLDSFE 480 WASGYTAHFG LIYVDRNDGF KGYMKKSAKW FKEFNGASRR VMNDKHGDVL DPALLGNQQV 540 K* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 1.0e-117 | 48 | 516 | 472 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-118 | 51 | 514 | 471 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-124 | 54 | 513 | 470 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-128 | 53 | 511 | 467 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 6.0e-175 | 50 | 515 | 477 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1V02 | 0 | 1 | 533 | 1 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
GenBank | AAD02839.1 | 0 | 1 | 527 | 1 | 558 | beta-D-glucosidase beta subunit precursor [Avena sativa] |
GenBank | AAK49119.1 | 0 | 3 | 523 | 5 | 553 | cyanogenic beta-glucosidase dhurrinase-2 [Sorghum bicolor] |
RefSeq | XP_002442029.1 | 0 | 1 | 533 | 1 | 561 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
RefSeq | XP_002442031.1 | 0 | 1 | 533 | 1 | 563 | hypothetical protein SORBIDRAFT_08g007586 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v02_E | 0 | 1 | 533 | 1 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v03_A | 0 | 1 | 533 | 1 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_F | 0 | 1 | 533 | 1 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_D | 0 | 1 | 533 | 1 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_C | 0 | 1 | 533 | 1 | 561 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
DIMBOA-glucoside activation | RXN-7082 | EC-3.2.1 | DIMBOA glucoside β-D-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK567908 | 243 | 170 | 412 | 0 |
JK571315 | 241 | 186 | 426 | 0 |
FL765225 | 257 | 111 | 366 | 0 |
JK554612 | 207 | 227 | 433 | 0 |
JK554612 | 27 | 458 | 484 | 0.0000000000003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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