CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00065073m
FamilyGH16
Protein PropertiesLength: 289 Molecular Weight: 31930.7 Isoelectric Point: 6.2402
ChromosomeChromosome/Scaffold: 012296 Start: 1 End: 1277
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16382107.5e-26
  TDGHVRADYNAQGQQVTSLILDRQSGGAFYSRQKYLYGVFSIQMKLIRGNSAGTVTSFYLTSGDGPGHDEIDMEFMGNSSGDPVVLNTNVWAAGDGKKEQ
  QFYLWFDPAADFHTYTIIWNDRNVIFKVDDLFVRSFRRHADLPYPGGKPMSVHATLWDGSFWATQQGKVKVDW
Full Sequence
Protein Sequence     Length: 289     Download
MAALRALSAA VALALALVAA SAAASASADS WLYEKFTTDG HVRADYNAQG QQVTSLILDR    60
QSGGAFYSRQ KYLYGVFSIQ MKLIRGNSAG TVTSFYLTSG DGPGHDEIDM EFMGNSSGDP    120
VVLNTNVWAA GDGKKEQQFY LWFDPAADFH TYTIIWNDRN VIFKVDDLFV RSFRRHADLP    180
YPGGKPMSVH ATLWDGSFWA TQQGKVKVDW AGAPFVVSYR GYSADACTPD GDGRPLSCPA    240
GTDRWMTRQL DAAEWVTVAW ARKNYMHYNY CEDGWRFPQG FPAECSRN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00413Glyco_hydrolase_161.0e-1655210174+
pfam06955XET_C5.0e-1723828551+
pfam00722Glyco_hydro_164.0e-5950212164+
PLN03161PLN031614.0e-6856287239+
cd02176GH16_XET1.0e-11733285258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG39534.1032889290xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACS13757.102928723282xyloglucan xyloglucosyl transferase [Hordeum vulgare]
RefSeqNP_001151500.102928827286LOC100285134 [Zea mays]
RefSeqXP_002446425.102728820277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
RefSeqXP_002447796.102928825287hypothetical protein SORBIDRAFT_06g015940 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B05028835275A Chain A, Crystal Structure Of Histone Acetyltransferase Hpa2 And Related Acetyltransferase (np_600742.1) From Corynebacterium Glutamicum Atcc 13032 At 1.90 A Resolution
PDB1un1_A05028835275A Chain A, Crystal Structure Of Histone Acetyltransferase Hpa2 And Related Acetyltransferase (np_600742.1) From Corynebacterium Glutamicum Atcc 13032 At 1.90 A Resolution
PDB1umz_B05028835275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A05028835275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2vh9_B04127655282A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide
Transmembrane Domains
StartEnd
726
Signal Peptide
Cleavage Site
28
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CO456605254292820
EE174431254292820
FE633116225652890
EC902220242292700
DR963014242292700
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny