Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00065296m |
Family | GT8 |
Protein Properties | Length: 266 Molecular Weight: 31127.5 Isoelectric Point: 9.4622 |
Chromosome | Chromosome/Scaffold: 0121648 Start: 659 End: 2009 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 53 | 237 | 0 |
NPDSNLKYRNSKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFDRYLNFSNPGIAKNFDPHACGWAFGMN VFDLAEWKRQNITQIYHSWQKLNQDRSLWKFGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGNMKPWLE |
Full Sequence |
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Protein Sequence Length: 266 Download |
MRMWFLSNPP GKATIEVQNT GEFTWLNDSY SPVLKQLGSQ SMIDYYFGTN RANPDSNLKY 60 RNSKYLSILN HLRFYLPEIY PKLDKMVFLD DDIVVKKDLT GLWSINMKGK VNGAVETCGE 120 SFHRFDRYLN FSNPGIAKNF DPHACGWAFG MNVFDLAEWK RQNITQIYHS WQKLNQDRSL 180 WKFGTLPPGL ITFWNKTFPL SRSWHVLGLG YNPHVNSRDI ERAAVIHYNG NMKPWLEIGL 240 PKFRSYWSKY LDYDQPFLRE CNINP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 7.0e-115 | 1 | 263 | 266 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 4.0e-137 | 1 | 265 | 268 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 2.0e-146 | 1 | 263 | 263 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 9.0e-154 | 1 | 264 | 268 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 1 | 265 | 265 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 1 | 265 | 385 | 649 | unknown [Zea mays] |
GenBank | EEC83383.1 | 0 | 1 | 265 | 357 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 1 | 265 | 379 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 1 | 265 | 384 | 648 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 1 | 265 | 384 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0007 | 62 | 235 | 75 | 252 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1g9r_A | 0.0007 | 62 | 235 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.001 | 62 | 235 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG936556 | 261 | 1 | 261 | 0 |
FL733414 | 228 | 25 | 252 | 0 |
JG891409 | 235 | 32 | 266 | 0 |
CD440189 | 241 | 26 | 266 | 0 |
HO343357 | 234 | 1 | 234 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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