Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00065332m |
Family | GH27 |
Protein Properties | Length: 311 Molecular Weight: 33657.7 Isoelectric Point: 5.3384 |
Chromosome | Chromosome/Scaffold: 0118401 Start: 120 End: 2450 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH27 | 69 | 168 | 2e-30 |
QQMPGSLGQEEQDAKTFASWGIDYLKYDNCNDQGMSPQPRYFSKMSRALLNSGRNIFFSICEWGIDNPATWAGGVGNSWRTAGDIKDEWGSMTSNADSND |
Full Sequence |
---|
Protein Sequence Length: 311 Download |
MVDTGLAKLG YEYINIDDCW AAHDRDSQGN LVPNPSTFPS GMKALSDYVH GKGLKLGIYS 60 DAGPRTCSQQ MPGSLGQEEQ DAKTFASWGI DYLKYDNCND QGMSPQPRYF SKMSRALLNS 120 GRNIFFSICE WGIDNPATWA GGVGNSWRTA GDIKDEWGSM TSNADSNDVW ASYARPGGWN 180 DPDMLEVGNG GMTTEEYRSH FSIWALAKAP LLASCDIRSM SKETKEILSN QNVIAVWAGP 240 LSGGRVAVVL WNRGPVEASI TARWSSIGLG ASTVVDAHDL WTDAVTSSVH GQLKAIVGTH 300 ACKMYVLTPK * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 1.0e-17 | 1 | 236 | 321 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 8.0e-20 | 7 | 152 | 200 | + Melibiase. | ||
PLN02229 | PLN02229 | 3.0e-147 | 1 | 309 | 333 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 2.0e-152 | 1 | 309 | 330 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 1 | 310 | 330 | + alpha-galactosidase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC66445.1 | 0 | 1 | 310 | 100 | 428 | alpha-galactosidase [Helianthus annuus] |
EMBL | CBI35340.1 | 0 | 1 | 309 | 77 | 405 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271010.1 | 0 | 1 | 309 | 40 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331416.1 | 0 | 1 | 310 | 39 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002459948.1 | 0 | 1 | 310 | 1 | 307 | hypothetical protein SORBIDRAFT_02g018580 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 309 | 35 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 1 | 304 | 35 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 1 | 310 | 45 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 1 | 310 | 45 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 1 | 272 | 45 | 346 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GT034265 | 308 | 1 | 288 | 0 |
DR943152 | 288 | 10 | 277 | 0 |
EH194075 | 313 | 19 | 311 | 0 |
DY821144 | 279 | 22 | 280 | 0 |
JG955138 | 281 | 1 | 261 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|