Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00065383m |
Family | GH17 |
Protein Properties | Length: 279 Molecular Weight: 30552.6 Isoelectric Point: 5.3192 |
Chromosome | Chromosome/Scaffold: 0120777 Start: 21 End: 1094 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 233 | 0 |
YVAVGNEPFLETYNGSFIKVTFPALQNIQNALNDVGVSDRIKATVPLNADVYNSPASDPVPSAGRFRSDISGLMTDIVKFLAKNNAPFTVNIYPFLSLYH NDNFPLDYAFFDGGATPVNDNGVLYTNVFDANFDTLVAALKAVGNGDMPVVVGEVGWPTDGDKHAKASYAERFYAGLLKRMAANTGTPARPNQYIEVYLF GLVDEDMKSVAPGNFERHWGILRYDGQPKYAMD |
Full Sequence |
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Protein Sequence Length: 279 Download |
YVAVGNEPFL ETYNGSFIKV TFPALQNIQN ALNDVGVSDR IKATVPLNAD VYNSPASDPV 60 PSAGRFRSDI SGLMTDIVKF LAKNNAPFTV NIYPFLSLYH NDNFPLDYAF FDGGATPVND 120 NGVLYTNVFD ANFDTLVAAL KAVGNGDMPV VVGEVGWPTD GDKHAKASYA ERFYAGLLKR 180 MAANTGTPAR PNQYIEVYLF GLVDEDMKSV APGNFERHWG ILRYDGQPKY AMDPGFLIPG 240 RNTMLLPAKG VKYLPRTWCA LNPNARDLGK LGANIDYTC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 140 | 225 | 86 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-52 | 1 | 233 | 234 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG29689.1 | 0 | 1 | 279 | 110 | 387 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
DDBJ | BAF20898.2 | 0 | 1 | 279 | 193 | 465 | Os07g0168600 [Oryza sativa Japonica Group] |
RefSeq | NP_001058984.1 | 0 | 1 | 279 | 114 | 386 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130924.1 | 0 | 1 | 279 | 111 | 388 | hypothetical protein LOC100192029 [Zea mays] |
RefSeq | XP_002459388.1 | 0 | 1 | 279 | 118 | 394 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 1e-35 | 1 | 233 | 89 | 313 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3ur8_A | 1e-35 | 1 | 233 | 89 | 313 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3ur7_B | 1e-35 | 1 | 233 | 89 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 1e-35 | 1 | 233 | 89 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 1e-34 | 1 | 233 | 89 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE071567 | 261 | 5 | 265 | 0 |
GR410464 | 281 | 1 | 279 | 0 |
EE190495 | 247 | 1 | 245 | 0 |
DY968639 | 279 | 1 | 277 | 0 |
DW056194 | 272 | 1 | 270 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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