CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00065689m
FamilyGT4
Protein PropertiesLength: 317 Molecular Weight: 36033.8 Isoelectric Point: 8.8425
ChromosomeChromosome/Scaffold: 0118161 Start: 1183 End: 3294
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT41663053.3e-21
  TTPPVLISVAQFRPEKAHGLQLEAFALALTRLDPHFPKPKLQFAGSCRNKEDLERLQKLKDRAFELHIDEIVEFHKDISYMELVQLLGGAIAGLHSMTDE
  HFGIVVVEYMAAGAIPIAHKSAGPMMDIVLDEDGQSNRIL
Full Sequence
Protein Sequence     Length: 317     Download
VVHLNKRKWI EASTYPHFTM IGQSLGSVYL AWEALTNFTP QFYFDTSGYA FTYPLAQLFG    60
CKVISYTHYP TISSDMVGRV KQHSSMYNNN SRIAGSIWLS RCKVLYYTIF SWLYGLVGSC    120
AHLVMVNSSW TKSHIVNIWK IPERTKRVYP PCDTSALQML PLERSTTPPV LISVAQFRPE    180
KAHGLQLEAF ALALTRLDPH FPKPKLQFAG SCRNKEDLER LQKLKDRAFE LHIDEIVEFH    240
KDISYMELVQ LLGGAIAGLH SMTDEHFGIV VVEYMAAGAI PIAHKSAGPM MDIVLDEDGQ    300
SNRILAPRKK NLLMQYQ 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00534Glycos_transf_13.0e-17167296130+
cd03801GT1_YqgM_like1.0e-1798298208+
cd03805GT1_ALG2_like4.0e-259289295+
cd03806GT1_ALG11_like2.0e-1541300302+
PLN02949PLN0294901306306+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABA99697.10131197407glycosyl transferase, group 1 family protein, expressed [Oryza sativa (japonica cultivar-group)]
GenBankEAY83676.10203111292hypothetical protein OsI_38900 [Oryza sativa Indica Group]
GenBankEAZ21019.10131153363hypothetical protein OsJ_36668 [Oryza sativa Japonica Group]
RefSeqNP_001142345.10131298409hypothetical protein LOC100274516 [Zea mays]
RefSeqXP_002443441.10131198408hypothetical protein SORBIDRAFT_08g019540 [Sorghum bicolor]
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesisRXN-5464EC-2.4.1.131GDP-Man:Man3GlcNAc2-PP-Dol α-1,2-mannosyltransferase
Transmembrane Domains
StartEnd
104126
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO84089930583120
GT050345275383120
JG947609225883120
CO126485272162870
BG838029236773120
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_045_00152.10Aquca_045_00152.3Aquca_045_00152.4Aquca_045_00152.7Aquca_045_00152.8
Aquca_045_00152.2Aquca_045_00152.1Aquca_013_00559.1Aquca_013_00559.3
Arabidopsis lyrata497266
Arabidopsis thalianaAT2G40190.1
Brachypodium distachyonBradi4g03380.2
Brassica rapaBra004979Bra017025
Capsella rubellaCarubv10023116m
Chlamydomonas reinhardtiig1252.t1
Citrus clementinaCiclev10031450m
Citrus sinensisorange1.1g012436m
Cucumis sativusCucsa.368390.1
Eucalyptus grandisEucgr.G03076.1
Glycine maxGlyma16g02840.1Glyma07g06210.1
Gossypium raimondiiGorai.013G017200.1
Linum usitatissimumLus10028977
Manihot esculentacassava4.1_010258m
Medicago truncatulaAC235758_14.1AC233112_1009.1
Mimulus guttatusmgv1a005920m
Oryza sativaLOC_Os12g39340.1
Panicum virgatumPavirv00014744m
Physcomitrella patensPp1s269_93V6.1
Phaseolus vulgarisPhvul.010G113600.1
Populus trichocarpaPotri.012G095500.1
Prunus persicappa005444m
Ricinus communis29814.m000733
Setaria italicaSi021990m
Selaginella moellendorffii80274
Sorghum bicolorSb08g019540.1
Thellungiella halophilaThhalv10016619m
Vitis viniferaGSVIVT01032791001
Volvox carteriVocar20008969m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny