Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00065946m |
Family | GH9 |
Protein Properties | Length: 318 Molecular Weight: 34696 Isoelectric Point: 8.4268 |
Chromosome | Chromosome/Scaffold: 0121831 Start: 1305 End: 2582 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 1 | 296 | 0 |
LFEFADKYRGKYDSSIAEVKSYYASVSGYHDELLWAALWLHRATGRAEFLDYAVDNAHAFGGTGWAITEFSWDVKYAGVQILAARLLLRGEHSPRHRETL ERYRAKAEHYVCACLGRNAAGGADANVERSPGGMLYIRQWNNMQYVTSAAFLLSVYSGYLLSPAAAGAAGEAVAACAGGGAATAGEVFAMARSQVDYVLG SNPRGMSYLVGYGARFPARVHHRAASIVPYKHSREFIGCAQGFDDWFVRKGANPNVVVGAIVGGPDRRDRFRDHRENYMQTEACTYNTAPMVGMFA |
Full Sequence |
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Protein Sequence Length: 318 Download |
LFEFADKYRG KYDSSIAEVK SYYASVSGYH DELLWAALWL HRATGRAEFL DYAVDNAHAF 60 GGTGWAITEF SWDVKYAGVQ ILAARLLLRG EHSPRHRETL ERYRAKAEHY VCACLGRNAA 120 GGADANVERS PGGMLYIRQW NNMQYVTSAA FLLSVYSGYL LSPAAAGAAG EAVAACAGGG 180 AATAGEVFAM ARSQVDYVLG SNPRGMSYLV GYGARFPARV HHRAASIVPY KHSREFIGCA 240 QGFDDWFVRK GANPNVVVGA IVGGPDRRDR FRDHRENYMQ TEACTYNTAP MVGMFAMLNR 300 LARDEVTAAA ADTSVNR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00759 | Glyco_hydro_9 | 9.0e-86 | 1 | 296 | 298 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 7.0e-90 | 1 | 298 | 298 | + endoglucanase | ||
PLN02340 | PLN02340 | 1.0e-114 | 1 | 302 | 302 | + endoglucanase | ||
PLN02171 | PLN02171 | 1.0e-125 | 1 | 298 | 298 | + endoglucanase | ||
PLN02420 | PLN02420 | 5.0e-139 | 1 | 298 | 298 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD45673.1 | 0 | 1 | 305 | 52 | 357 | putative endo-beta-1,4-glucanase precursor [Oryza sativa Japonica Group] |
RefSeq | NP_001057286.1 | 0 | 1 | 305 | 129 | 434 | Os06g0247900 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q6Z5P2 | 0 | 1 | 305 | 216 | 514 | GUN7_ORYSJ RecName: Full=Endoglucanase 7; AltName: Full=Endo-1,4-beta glucanase 7; AltName: Full=OsGLU10; Flags: Precursor |
RefSeq | XP_002438149.1 | 0 | 1 | 317 | 52 | 373 | hypothetical protein SORBIDRAFT_10g008880 [Sorghum bicolor] |
RefSeq | XP_002454315.1 | 0 | 1 | 305 | 246 | 544 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 4e-38 | 1 | 298 | 184 | 429 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1ksc_A | 4e-38 | 1 | 298 | 184 | 429 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1ks8_A | 4e-38 | 1 | 298 | 184 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 8e-30 | 1 | 301 | 206 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4doe_A | 1e-24 | 1 | 301 | 207 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL931053 | 268 | 38 | 305 | 0 |
GR331050 | 261 | 30 | 290 | 0 |
GR334562 | 259 | 51 | 309 | 0 |
EG396203 | 234 | 29 | 262 | 0 |
CV760011 | 235 | 1 | 235 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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