Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00065954m |
Family | GH100 |
Protein Properties | Length: 568 Molecular Weight: 63354.9 Isoelectric Point: 6.9079 |
Chromosome | Chromosome/Scaffold: 0120726 Start: 434 End: 2829 |
Description | cytosolic invertase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH100 | 99 | 553 | 0 |
HPLVGEAWDALRRSLVSFRGQPLGTIAAVDHSAGEVLNYDQVFVRDFVPSALAFLMNGEPEVVRNFLVKTLLLQGWEKRIDRFKLGEGAMPSSFKVLKDP KRGVDKLVADFGESAIGRVAPVDSGFWWIIILRAYTKSTGDMTLAEAPMCQKGIRLIMNQCLAEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFM ALRCALLMLKPDAEGKEIMERIVTRLAALSYHVRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVNPESIPDWLLDFMPTRGGYFVGNVSPARMDFRWFA LGNCVAILASLATPDQAAAIMDLIEERWEDLVGEMPVKICYPAIEGHEWQTVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRLKIARRAIELAEAR LARDGWPEYYDGKLGRYVGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDK |
Full Sequence |
---|
Protein Sequence Length: 568 Download |
MESAAMRRAS SLADPEDFDL TRLLNHKPRI NVEWQRSFDD RSLSELSLSG AGAGGRGGWG 60 GCGAGAGAES YESMYSPGGG LRSYCGTPAS SARLSFEPHP LVGEAWDALR RSLVSFRGQP 120 LGTIAAVDHS AGEVLNYDQV FVRDFVPSAL AFLMNGEPEV VRNFLVKTLL LQGWEKRIDR 180 FKLGEGAMPS SFKVLKDPKR GVDKLVADFG ESAIGRVAPV DSGFWWIIIL RAYTKSTGDM 240 TLAEAPMCQK GIRLIMNQCL AEGFDTFPTL LCADGCCMID RRMGVYGYPI EIQALFFMAL 300 RCALLMLKPD AEGKEIMERI VTRLAALSYH VRSYFWLDFQ QLNDIYRYKT EEYSHTAVNK 360 FNVNPESIPD WLLDFMPTRG GYFVGNVSPA RMDFRWFALG NCVAILASLA TPDQAAAIMD 420 LIEERWEDLV GEMPVKICYP AIEGHEWQTV TGCDPKNTRW SYHNGGSWPV LLWLLTAACI 480 KTGRLKIARR AIELAEARLA RDGWPEYYDG KLGRYVGKQA RKFQTWSIAG YLVAKMMLED 540 PSHLGMISLE EDKAMKPVLR RSASWTV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.001 | 218 | 536 | 332 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 11 | 566 | 556 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 10 | 566 | 558 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 104 | 541 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 72 | 567 | 501 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001047095.1 | 0 | 3 | 566 | 7 | 561 | Os02g0550600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001052830.1 | 0 | 1 | 567 | 1 | 574 | Os04g0432400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147920.1 | 0 | 1 | 566 | 1 | 567 | neutral/alkaline invertase [Zea mays] |
RefSeq | XP_002452632.1 | 0 | 1 | 566 | 2 | 571 | hypothetical protein SORBIDRAFT_04g029440 [Sorghum bicolor] |
RefSeq | XP_002453965.1 | 0 | 6 | 566 | 9 | 558 | hypothetical protein SORBIDRAFT_04g022350 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
ES848839 | 357 | 203 | 557 | 0 |
CK269009 | 331 | 238 | 568 | 0 |
HO466454 | 479 | 80 | 555 | 0 |
ES809234 | 324 | 228 | 551 | 0 |
ES810060 | 309 | 124 | 432 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|