| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00065976m |
| Family | GH9 |
| Protein Properties | Length: 184 Molecular Weight: 19456 Isoelectric Point: 9.7915 |
| Chromosome | Chromosome/Scaffold: 0116387 Start: 57 End: 939 |
| Description | glycosyl hydrolase 9B13 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 8 | 174 | 0 |
| DQTQYTRGGLPFKLSDSNMQYVTSSAFLLLTYAKYLAFARQTVSCGGGGGGAVVTPQRLRAIARRQVDYLLGSNPAGMSYMVGYGARYPRRVHHRASSLP SVAAHPRRIGCSQGFAALYAGGANPNVLVGAVVGGPDLQDRFPDQRSDHEHSEPATYINAPLVGALA | |||
| Full Sequence |
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| Protein Sequence Length: 184 Download |
| MVPGTPADQT QYTRGGLPFK LSDSNMQYVT SSAFLLLTYA KYLAFARQTV SCGGGGGGAV 60 VTPQRLRAIA RRQVDYLLGS NPAGMSYMVG YGARYPRRVH HRASSLPSVA AHPRRIGCSQ 120 GFAALYAGGA NPNVLVGAVV GGPDLQDRFP DQRSDHEHSE PATYINAPLV GALAYLAHSY 180 GQL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 3.0e-59 | 1 | 176 | 178 | + endoglucanase | ||
| PLN03009 | PLN03009 | 1.0e-61 | 1 | 177 | 177 | + cellulase | ||
| PLN02175 | PLN02175 | 4.0e-62 | 1 | 177 | 177 | + endoglucanase | ||
| PLN02308 | PLN02308 | 6.0e-72 | 1 | 179 | 180 | + endoglucanase | ||
| PLN02266 | PLN02266 | 2.0e-113 | 1 | 183 | 183 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86167.1 | 0 | 1 | 183 | 160 | 338 | unknown [Zea mays] |
| GenBank | ACN25528.1 | 0 | 1 | 183 | 323 | 501 | unknown [Zea mays] |
| GenBank | EAY73719.1 | 0 | 1 | 183 | 329 | 507 | hypothetical protein OsI_01596 [Oryza sativa Indica Group] |
| RefSeq | NP_001151458.1 | 0 | 1 | 183 | 323 | 501 | endoglucanase 1 [Zea mays] |
| Swiss-Prot | Q8LQ92 | 0 | 1 | 183 | 321 | 499 | GUN3_ORYSJ RecName: Full=Endoglucanase 3; AltName: Full=Endo-1,4-beta glucanase 3; AltName: Full=OsGLU8; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ia7_A | 2e-18 | 9 | 174 | 290 | 424 | A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate |
| PDB | 1ia6_A | 2e-18 | 9 | 174 | 290 | 424 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| PDB | 4tf4_B | 0.000000000000006 | 12 | 181 | 302 | 445 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| PDB | 4tf4_A | 0.000000000000006 | 12 | 181 | 302 | 445 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| PDB | 3tf4_B | 0.000000000000006 | 12 | 181 | 302 | 445 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV517577 | 171 | 14 | 184 | 0 |
| DY236651 | 165 | 20 | 184 | 0 |
| DV020548 | 163 | 22 | 184 | 0 |
| DW468500 | 162 | 23 | 184 | 0 |
| DV171576 | 162 | 23 | 184 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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