Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00066372m |
Family | GT20 |
Protein Properties | Length: 864 Molecular Weight: 97613 Isoelectric Point: 6.244 |
Chromosome | Chromosome/Scaffold: 011706 Start: 4835 End: 8297 |
Description | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT20 | 55 | 547 | 0 |
RPRTIVVANQLPIRSHRPASPEEPWTFDWDEDALLRHLHHTSPPSMEFIYIGCLRDDIPQAEQDAVAQALLDTHNCVPAFLPPDIAERYYHGFCKQHLWP LFHYMLPLSPDLGGRFDRALWQAYVSANKIFADKVLEVINPDDDFVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYKTLPVREELLRALLNSD LIGFHTFDYARHFLSCCSRMLGLSYESKRGNICLEYYGRTVSIKILPVGVHMEQLKAVLGQPETEAKVAELMGMYMGKGRVVMLGVDDMDIFKGISLKLL AMEELLRQHPEWRGKLVLVQVANPARGRGKDVAEVQAETYAMVRRINEVYGEPGYEPVVLIDEPLQFYERVAYYVIAEVCLVTAVRDGMNLIPYEYIVSR QGNEALDRMLLRQGKPEGKKSMLVVSEFIGCSPSLSGAVRVNPWNIEAVADAMESALVLPESEKRLRHDKHFRYVNTHDVGYWANSFLVDLKR |
Full Sequence |
---|
Protein Sequence Length: 864 Download |
MVSRSYSNLL DLATGAADQA PAAGALGALR RRLPRVVTNS GLIDDSPASP SVPPRPRTIV 60 VANQLPIRSH RPASPEEPWT FDWDEDALLR HLHHTSPPSM EFIYIGCLRD DIPQAEQDAV 120 AQALLDTHNC VPAFLPPDIA ERYYHGFCKQ HLWPLFHYML PLSPDLGGRF DRALWQAYVS 180 ANKIFADKVL EVINPDDDFV WVHDYHLMVL PTFLRKRFNR IKLGFFLHSP FPSSEIYKTL 240 PVREELLRAL LNSDLIGFHT FDYARHFLSC CSRMLGLSYE SKRGNICLEY YGRTVSIKIL 300 PVGVHMEQLK AVLGQPETEA KVAELMGMYM GKGRVVMLGV DDMDIFKGIS LKLLAMEELL 360 RQHPEWRGKL VLVQVANPAR GRGKDVAEVQ AETYAMVRRI NEVYGEPGYE PVVLIDEPLQ 420 FYERVAYYVI AEVCLVTAVR DGMNLIPYEY IVSRQGNEAL DRMLLRQGKP EGKKSMLVVS 480 EFIGCSPSLS GAVRVNPWNI EAVADAMESA LVLPESEKRL RHDKHFRYVN THDVGYWANS 540 FLVDLKRTCV DHDKRRCWGI GFGLRFRVVS LDLSFKKLSL ESILMAYRRA KKRAVLLDYD 600 GTLMPQAINK SPSAESVRIL NSLCRDKSNE VYLCSGYDRR TLHEWFPCEN LGIAAEHGYF 660 VRCRRDAEWQ TCITAADCSW KQIAKPVMRL YRETTDGSTI EDRETVLVWN YEDADPDFGS 720 CQAKELVDHL ESVLANEPVS VKTTPHSVEV KPQGVSKGLV ARRMLASMQE RGECPDFVLC 780 IGDDKSDEDM FQLLATAPCG ASLASKAEVF ACTVGRKPSK AKYYLDDAAE VVRLMLGLSY 840 VSEELALANH RDEDDDSSLD VWE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 3.0e-164 | 59 | 842 | 824 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN02205 | PLN02205 | 0 | 1 | 844 | 854 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 59 | 547 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 114 | 839 | 729 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
cd03788 | GT1_TPS | 0 | 59 | 545 | 487 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN52740.1 | 0 | 1 | 856 | 1 | 859 | Putative trehalose-6-phosphate synthase [Oryza sativa Japonica Group] |
GenBank | ADA67991.1 | 0 | 1 | 851 | 1 | 850 | trehalose-6-phosphate synthase [Zea mays] |
GenBank | EEC74792.1 | 0 | 1 | 856 | 1 | 859 | hypothetical protein OsI_10580 [Oryza sativa Indica Group] |
RefSeq | NP_001049428.1 | 0 | 101 | 856 | 1 | 755 | Os03g0224300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465620.1 | 0 | 1 | 863 | 1 | 862 | hypothetical protein SORBIDRAFT_01g042380 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 141 | 549 | 74 | 455 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO777775 | 770 | 79 | 845 | 0 |
HO779327 | 519 | 96 | 613 | 0 |
HO779327 | 237 | 609 | 843 | 0 |
HO797286 | 471 | 376 | 844 | 0 |
HO795560 | 429 | 420 | 845 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|