| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00067346m |
| Family | AA1 |
| Protein Properties | Length: 605 Molecular Weight: 65704.4 Isoelectric Point: 8.351 |
| Chromosome | Chromosome/Scaffold: 020228 Start: 1768 End: 4286 |
| Description | laccase 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 31 | 314 | 0 |
| RFYEFVVKETLVKRLCKAQKIITVNGQFPGPTIEVYNGDTVAIKALNLARYNVTLHWHGLRQLRNGWADGPEFVTQCPIRPGGSYTYRFTIQDQEGTLWW HAHSSWLRATVHGALIIHPRRGLPYPFPKPHSEVPVILAEWWRRDPIAVLRQSMITGAPPNVSDALLINGQPGDFLPCSSQETSIIPVVAGETSLLRIIN AAMNTELFVSLAGHRMTVVAADAMYTKPFETTVVLLGPGQTTDVLVTAHAAPGRYYLAARAYASAQGVPFDNTTATAIFQYKNA | |||
| AA1 | 355 | 586 | 0 |
| PPMLPFLPTFNDTRTATAFSNSIRSPEPVKVPGPVTQEVFTTVGFGLFNCRPGPFCQGPNNTRFGASMNNVSFQLPSTVSLLQAHYHRIPGVFTDDFPAF PPVLFDFTSQSVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDPRRDAARFNLVDPPSRNTVGVPVGGWAVVRF VADNPGVWLVHCHIDAHLTGGLAMALLVEDGE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 605 Download |
| MARSGIVKLL CSSALLLLCC FLLPGALAEE RFYEFVVKET LVKRLCKAQK IITVNGQFPG 60 PTIEVYNGDT VAIKALNLAR YNVTLHWHGL RQLRNGWADG PEFVTQCPIR PGGSYTYRFT 120 IQDQEGTLWW HAHSSWLRAT VHGALIIHPR RGLPYPFPKP HSEVPVILAE WWRRDPIAVL 180 RQSMITGAPP NVSDALLING QPGDFLPCSS QETSIIPVVA GETSLLRIIN AAMNTELFVS 240 LAGHRMTVVA ADAMYTKPFE TTVVLLGPGQ TTDVLVTAHA APGRYYLAAR AYASAQGVPF 300 DNTTATAIFQ YKNAPGCPTT ATTAGAGAGA NTFNGPVGRS SATSSGRHLG RTGPPPMLPF 360 LPTFNDTRTA TAFSNSIRSP EPVKVPGPVT QEVFTTVGFG LFNCRPGPFC QGPNNTRFGA 420 SMNNVSFQLP STVSLLQAHY HRIPGVFTDD FPAFPPVLFD FTSQSVPRAL WQPVKGTRLY 480 RVRYGAVVQI VFQDTGIFAA EEHPMHIHGY HFYVLATGFG NYDPRRDAAR FNLVDPPSRN 540 TVGVPVGGWA VVRFVADNPG VWLVHCHIDA HLTGGLAMAL LVEDGESQLE ATMPPPLDLP 600 ICVL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 7.0e-51 | 36 | 152 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 2.0e-59 | 46 | 578 | 561 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-72 | 31 | 585 | 589 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 8.0e-77 | 31 | 585 | 589 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 31 | 602 | 576 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF11755.2 | 0 | 3 | 604 | 6 | 630 | Os03g0297900 [Oryza sativa Japonica Group] |
| GenBank | EEE58886.1 | 0 | 37 | 604 | 91 | 679 | hypothetical protein OsJ_10502 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049841.1 | 0 | 10 | 604 | 3 | 681 | Os03g0297900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001145891.1 | 0 | 1 | 604 | 4 | 607 | hypothetical protein LOC100279407 [Zea mays] |
| RefSeq | XP_002468016.1 | 0 | 1 | 604 | 5 | 600 | hypothetical protein SORBIDRAFT_01g038130 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 580 | 1 | 521 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asq_A | 0 | 28 | 580 | 1 | 521 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asp_B | 0 | 28 | 580 | 1 | 521 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asp_A | 0 | 28 | 580 | 1 | 521 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1aso_B | 0 | 28 | 580 | 1 | 521 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
