Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00067366m |
Family | GH17 |
Protein Properties | Length: 388 Molecular Weight: 41056.9 Isoelectric Point: 5.5595 |
Chromosome | Chromosome/Scaffold: 020590 Start: 5206 End: 7653 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 38 | 353 | 0 |
GINYGQIANNLPHPAQVSGLLQSLNVNRVKLYDADPAVLTAFAGTGVEFIVGNEDLQNLTDAGKARAWVAQHVQPFIPSTRITCITVGNEVLSGKDTVAM QNLLPAMQAMHQAVSDLGLAGQVNVSTAHSVNILASSYPPSSGVFREELAQYIQPILNFHAEVRSPFLINAYPFFAYKASPGSVSLPYVLFEPNPGVVDP NTNLTYDNMLYAQIDAVYAAMKAMGHTDLTVRISETGWPSKGDGDEVGATVANAAAYNGNLMKRIAMGQGTPLKPDVPIDVFVFALFNEDMKPGPASERN YGLFYPNGTPVYNLGF |
Full Sequence |
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Protein Sequence Length: 388 Download |
MAPAGLHAVA VRVLLLSLLA VSAIDVVSAA TAAPLKFGIN YGQIANNLPH PAQVSGLLQS 60 LNVNRVKLYD ADPAVLTAFA GTGVEFIVGN EDLQNLTDAG KARAWVAQHV QPFIPSTRIT 120 CITVGNEVLS GKDTVAMQNL LPAMQAMHQA VSDLGLAGQV NVSTAHSVNI LASSYPPSSG 180 VFREELAQYI QPILNFHAEV RSPFLINAYP FFAYKASPGS VSLPYVLFEP NPGVVDPNTN 240 LTYDNMLYAQ IDAVYAAMKA MGHTDLTVRI SETGWPSKGD GDEVGATVAN AAAYNGNLMK 300 RIAMGQGTPL KPDVPIDVFV FALFNEDMKP GPASERNYGL FYPNGTPVYN LGFNGASFSP 360 SPTFSSSSKP TTTFLMAVVV LLAGFFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 38 | 344 | 322 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 9.0e-98 | 38 | 353 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG28556.1 | 0 | 27 | 385 | 36 | 395 | glucan endo-1,3-beta-glucosidase 7 precursor [Zea mays] |
GenBank | EEC79302.1 | 0 | 26 | 387 | 29 | 393 | hypothetical protein OsI_20133 [Oryza sativa Indica Group] |
RefSeq | NP_001044874.1 | 0 | 24 | 369 | 22 | 375 | Os01g0860800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131225.1 | 0 | 27 | 385 | 36 | 394 | hypothetical protein LOC100192534 [Zea mays] |
RefSeq | XP_002441180.1 | 0 | 34 | 387 | 55 | 410 | hypothetical protein SORBIDRAFT_09g021800 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 38 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_C | 0 | 38 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_B | 0 | 38 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_A | 0 | 38 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3em5_D | 0 | 38 | 354 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |