y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00067372m |
Family | GT14 |
Protein Properties | Length: 188 Molecular Weight: 21140.3 Isoelectric Point: 11.1908 |
Chromosome | Chromosome/Scaffold: 0203752 Start: 717 End: 1533 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 10 | 93 | 5.2e-31 |
HSAGSAWTMLSRPFAEYVTMGWDNLPRTLLLYHANIISSPEFYFQTVACNSRRFRNATVNHDLHFIRWDNPPKQHPLHLTARDY |
Full Sequence |
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Protein Sequence Length: 188 Download |
MNRCLIQLTH SAGSAWTMLS RPFAEYVTMG WDNLPRTLLL YHANIISSPE FYFQTVACNS 60 RRFRNATVNH DLHFIRWDNP PKQHPLHLTA RDYRRMLLSG APFARKFREG DPVLDRIDRD 120 ILRRRGPAQF AYGGWCAGDG DAVAALCGNP QEPGRKGAVR AGAGSRRLKV LLGKALAPGN 180 LRRKQCR* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-21 | 13 | 97 | 89 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 7.0e-57 | 13 | 187 | 175 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33323.1 | 0 | 12 | 187 | 226 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ACN36394.1 | 0 | 12 | 187 | 251 | 430 | unknown [Zea mays] |
RefSeq | NP_001064674.1 | 0 | 12 | 187 | 244 | 420 | Os10g0437000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002467195.1 | 0 | 12 | 187 | 247 | 426 | hypothetical protein SORBIDRAFT_01g021260 [Sorghum bicolor] |
RefSeq | XP_002525678.1 | 0 | 12 | 187 | 99 | 271 | acetylglucosaminyltransferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL915768 | 181 | 12 | 188 | 0 |
FL904662 | 175 | 16 | 188 | 0 |
FL904661 | 175 | 16 | 188 | 0 |
FL794784 | 177 | 15 | 188 | 0 |
DV503390 | 180 | 13 | 188 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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