y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00067390m |
Family | CE10 |
Protein Properties | Length: 274 Molecular Weight: 29101.3 Isoelectric Point: 5.8717 |
Chromosome | Chromosome/Scaffold: 0210062 Start: 744 End: 1967 |
Description | carboxyesterase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 80 | 271 | 1.9e-37 |
VVVSVDYRLAPEHPLPAAYEDSLAALEWVLAAADPWLAAHGDPARVFLAGDSAGGNIFHHLAMHPDIRQGAGLRGAVPILIHPWKKHLWELVCPGAADGV DDPRMNPTAPAAPGLEGLACERVLVCVAEGDHLRWRGVAYAEAVARAKKQRGEQPPAVELFESEGVGHVFHLLDPEMEEAKRLLDRIAAFVG |
Full Sequence |
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Protein Sequence Length: 274 Download |
MTGATVAVGS DGDDDEVVHD FSPLLLVYRS GRLVPPGLDA ATGVESRASR RFKTMVQGRA 60 PLHLLHLNDL AAACPAVAPV VVSVDYRLAP EHPLPAAYED SLAALEWVLA AADPWLAAHG 120 DPARVFLAGD SAGGNIFHHL AMHPDIRQGA GLRGAVPILI HPWKKHLWEL VCPGAADGVD 180 DPRMNPTAPA APGLEGLACE RVLVCVAEGD HLRWRGVAYA EAVARAKKQR GEQPPAVELF 240 ESEGVGHVFH LLDPEMEEAK RLLDRIAAFV GAK* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK10162 | PRK10162 | 0.006 | 85 | 136 | 53 | + acetyl esterase; Provisional | ||
cd00312 | Esterase_lipase | 0.002 | 86 | 148 | 72 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG0657 | Aes | 1.0e-19 | 85 | 272 | 209 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 6.0e-34 | 85 | 251 | 190 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG41233.1 | 0 | 13 | 270 | 10 | 319 | gibberellin receptor GID1L2 [Zea mays] |
EMBL | CAH67096.1 | 0 | 12 | 273 | 6 | 317 | H0818E04.13 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY94325.1 | 0 | 12 | 273 | 6 | 317 | hypothetical protein OsI_16093 [Oryza sativa Indica Group] |
RefSeq | NP_001052933.1 | 0 | 12 | 273 | 6 | 317 | Os04g0449800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142317.1 | 0 | 14 | 270 | 11 | 319 | hypothetical protein LOC100274486 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 4e-21 | 80 | 273 | 148 | 351 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 2zsh_A | 4e-21 | 80 | 273 | 148 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 1e-18 | 23 | 273 | 113 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 1e-18 | 23 | 273 | 113 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 1e-18 | 23 | 273 | 113 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE186670 | 192 | 101 | 270 | 0 |
EE186669 | 192 | 101 | 270 | 0 |
EE028284 | 274 | 2 | 216 | 0 |
FL819322 | 201 | 92 | 274 | 0 |
EE183620 | 180 | 110 | 270 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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