Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00067539m |
Family | GT20 |
Protein Properties | Length: 832 Molecular Weight: 94270.3 Isoelectric Point: 6.5089 |
Chromosome | Chromosome/Scaffold: 020688 Start: 6385 End: 9125 |
Description | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 55 | 547 | 0 |
RPRTIVVANQLPIRSHRPGSPEEPWTFDWDEDALLRHLHHTSPPSMEFIYIGCLRDDIPQADQDAVAQALLDTHNCVPAFLPPDIAERYYHGFCKQHLWP LFHYMLPLSPDLGGRFDRTLWQAYVSANKIFADKVLEVINPDDDFVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYKTLPVREELLRALLNSD LIGFHTFDYARHFLSCCSRMLGLSYESKRGHICLEYYGRTVSIKILPVGVHMEQLKTVLGLPETEAKVAELMEMYMGKGRVVMLGVDDMDIFKGISLKLL AMEELLRQHPEWRGKLVLVQVANPARGRGKDVAEVQAETYAMVRRINELYGEPGYEPVVLIDEPLQFYERVAYYVIAEVCLVTAVRDGMNLIPYEYIVSR QGNETLDRMQLRQGKPEGKKSMLVVSEFIGCSPSLSGAVRVNPWNIEAVADAMESALVLPESEKRLRHDKHFRYVSTHDVGYWANSFLVDLER |
Full Sequence |
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Protein Sequence Length: 832 Download |
MVSRSYTNLL DLATGAADQA PAAAALGALR RRLPRVVTNS GLIDDTPASP SVPPRPRTIV 60 VANQLPIRSH RPGSPEEPWT FDWDEDALLR HLHHTSPPSM EFIYIGCLRD DIPQADQDAV 120 AQALLDTHNC VPAFLPPDIA ERYYHGFCKQ HLWPLFHYML PLSPDLGGRF DRTLWQAYVS 180 ANKIFADKVL EVINPDDDFV WVHDYHLMVL PTFLRKRFNR IKLGFFLHSP FPSSEIYKTL 240 PVREELLRAL LNSDLIGFHT FDYARHFLSC CSRMLGLSYE SKRGHICLEY YGRTVSIKIL 300 PVGVHMEQLK TVLGLPETEA KVAELMEMYM GKGRVVMLGV DDMDIFKGIS LKLLAMEELL 360 RQHPEWRGKL VLVQVANPAR GRGKDVAEVQ AETYAMVRRI NELYGEPGYE PVVLIDEPLQ 420 FYERVAYYVI AEVCLVTAVR DGMNLIPYEY IVSRQGNETL DRMQLRQGKP EGKKSMLVVS 480 EFIGCSPSLS GAVRVNPWNI EAVADAMESA LVLPESEKRL RHDKHFRYVS THDVGYWANS 540 FLVDLERTCE DHDKRRCWGI GFGLRFRVVS LDLSFKKLSL ESILMAYRRA KKRAVLLDYD 600 GTLMPQAINK SPSAESVRIL NSLCRDKKNE VYLCSGYDRR TLHEWFPCEN LGIAAEHGYF 660 VRSRRDSEWQ TCITAADCSW KQIAKPVMCL YRETTDGSTI EDRETILVWN YEDADPDFGS 720 CQAKELVDHL ESVLANEPVS VKTTPHSVEV KPQGVSKGLV ARRMLASMQE RGQCPDFVLC 780 IGDDKSDEDM FQLLATAPCG ASLASKAEVF ACTVGRKPSK AKYYLDDAAE VV 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 2.0e-167 | 55 | 832 | 817 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN02205 | PLN02205 | 0 | 1 | 832 | 842 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 56 | 547 | 495 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 125 | 831 | 710 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
cd03788 | GT1_TPS | 0 | 57 | 546 | 490 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN52740.1 | 0 | 1 | 832 | 1 | 835 | Putative trehalose-6-phosphate synthase [Oryza sativa Japonica Group] |
GenBank | ADA67991.1 | 0 | 1 | 832 | 1 | 831 | trehalose-6-phosphate synthase [Zea mays] |
GenBank | EEC74792.1 | 0 | 1 | 832 | 1 | 835 | hypothetical protein OsI_10580 [Oryza sativa Indica Group] |
RefSeq | NP_001049428.1 | 0 | 101 | 832 | 1 | 731 | Os03g0224300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465620.1 | 0 | 1 | 832 | 1 | 831 | hypothetical protein SORBIDRAFT_01g042380 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 141 | 549 | 73 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 141 | 549 | 74 | 455 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 757 | 79 | 832 | 0 |
HO779327 | 519 | 96 | 613 | 0 |
HO779327 | 226 | 609 | 832 | 0 |
HO797286 | 459 | 376 | 832 | 0 |
HO795560 | 416 | 420 | 832 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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