Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00068125m |
Family | GT37 |
Protein Properties | Length: 549 Molecular Weight: 60845.5 Isoelectric Point: 7.7254 |
Chromosome | Chromosome/Scaffold: 009452 Start: 10781 End: 12535 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 73 | 521 | 0 |
PPERETRDVLLGGLLSPDVDEASCRSRYLSSLHRAPSPHSPSPYLVSRLRRYEALHRRCGPGTPSYDKSVRQLASAHHSMGLAECSYLVWTPGSHLGDRV LSMASAFLYALLTRRVFLVDMATDMAGLFCEPFPGASWELPPGFPVRNLTRLRRGSEHSYGSLLGAKKIRNEDPAGVRSESLPSYAYLHLAHDYQLPDQL FFCDDDQTVLGKVNWLVLRSDLYFAPGLFLVPQFEDELRWMFPAADTVFHHIGRYLFHPSNKVWKIIAGYYTSYMAKFDEKIGIQIATLAGNPVSAEAYF KQVTACTSQEKILPEIDPDAASTDYEAAATSKAVFVSSAQPEYAERLRSMYYEHATVTGESVSVLKQPGARKQPQNQKLLLEMFLQSYCNVSVVSGWSTV GYVGHGLAGVKPWLLPPPPRNQTVANPPCVRATSMEPCFHAPPSYDCRA |
Full Sequence |
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Protein Sequence Length: 549 Download |
MRPPRAPPQP AAARSAAWPV GLLVALCFTT LPLFLALSPG RPSLLDLWQQ MGIRVTVHYD 60 DETRPSEPSS DPPPERETRD VLLGGLLSPD VDEASCRSRY LSSLHRAPSP HSPSPYLVSR 120 LRRYEALHRR CGPGTPSYDK SVRQLASAHH SMGLAECSYL VWTPGSHLGD RVLSMASAFL 180 YALLTRRVFL VDMATDMAGL FCEPFPGASW ELPPGFPVRN LTRLRRGSEH SYGSLLGAKK 240 IRNEDPAGVR SESLPSYAYL HLAHDYQLPD QLFFCDDDQT VLGKVNWLVL RSDLYFAPGL 300 FLVPQFEDEL RWMFPAADTV FHHIGRYLFH PSNKVWKIIA GYYTSYMAKF DEKIGIQIAT 360 LAGNPVSAEA YFKQVTACTS QEKILPEIDP DAASTDYEAA ATSKAVFVSS AQPEYAERLR 420 SMYYEHATVT GESVSVLKQP GARKQPQNQK LLLEMFLQSY CNVSVVSGWS TVGYVGHGLA 480 GVKPWLLPPP PRNQTVANPP CVRATSMEPC FHAPPSYDCR AKKNGDLGAV LRYVRHCEVS 540 GDGLKLFD* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
cd11548 | NodZ_like | 0.0007 | 160 | 255 | 102 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. |
pfam03254 | XG_FTase | 0 | 80 | 521 | 450 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ09379.1 | 0 | 40 | 547 | 45 | 551 | hypothetical protein OsI_31652 [Oryza sativa Indica Group] |
GenBank | EAZ24717.1 | 0 | 79 | 548 | 189 | 662 | hypothetical protein OsJ_08487 [Oryza sativa Japonica Group] |
RefSeq | NP_001048209.1 | 0 | 2 | 548 | 7 | 574 | Os02g0763200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001063373.1 | 0 | 40 | 548 | 45 | 552 | Os09g0458100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002462490.1 | 0 | 2 | 548 | 3 | 548 | hypothetical protein SORBIDRAFT_02g026640 [Sorghum bicolor] |