y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00068345m |
Family | GH95 |
Protein Properties | Length: 343 Molecular Weight: 38444.9 Isoelectric Point: 5.7318 |
Chromosome | Chromosome/Scaffold: 008220 Start: 5281 End: 7690 |
Description | 1,2-alpha-L-fucosidases |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH95 | 1 | 307 | 0 |
MGGAWLCIHLWEHYQFSLDKDFLENKAYPLLEGCATFLVDWLIDGHGGYLETNPSTSPEHAFLTPDGQPASVSYSTTMDIMIIREVFSAVLLSAEVLGKS DTDLVKNIKKALPRLPPIQIARDRTIMEWALDFQDPEIHHRHLSHLFGLYPGHTITLEKNADVCEAAANSLYKRGEDGPGWSTTWKMALWARLFNSENAY RMVLKLITVVPPGEKVDFEGGLYNNLWTAHPPFQIDANFGFTAAIAEMLLQSTQNDLYLLPALPRDKWPRGCVKGLRARGDVTVNLCWDEGELQEALLWS NHGNSVT |
Full Sequence |
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Protein Sequence Length: 343 Download |
MGGAWLCIHL WEHYQFSLDK DFLENKAYPL LEGCATFLVD WLIDGHGGYL ETNPSTSPEH 60 AFLTPDGQPA SVSYSTTMDI MIIREVFSAV LLSAEVLGKS DTDLVKNIKK ALPRLPPIQI 120 ARDRTIMEWA LDFQDPEIHH RHLSHLFGLY PGHTITLEKN ADVCEAAANS LYKRGEDGPG 180 WSTTWKMALW ARLFNSENAY RMVLKLITVV PPGEKVDFEG GLYNNLWTAH PPFQIDANFG 240 FTAAIAEMLL QSTQNDLYLL PALPRDKWPR GCVKGLRARG DVTVNLCWDE GELQEALLWS 300 NHGNSVTRLH YGELVTAIAV CSSTIYKFNR GLQCLEAWPL GK* 360 |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG66022.1 | 0 | 1 | 338 | 471 | 812 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | ABG66023.1 | 0 | 1 | 338 | 364 | 705 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC79728.1 | 0 | 1 | 338 | 471 | 812 | hypothetical protein OsI_21058 [Oryza sativa Indica Group] |
RefSeq | NP_001064381.1 | 0 | 1 | 340 | 511 | 851 | Os10g0339600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002461732.1 | 0 | 1 | 298 | 535 | 832 | hypothetical protein SORBIDRAFT_02g007180 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rdy_B | 0 | 1 | 320 | 448 | 758 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
PDB | 2rdy_A | 0 | 1 | 320 | 448 | 758 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
PDB | 2eac_B | 2e-32 | 5 | 303 | 510 | 844 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
PDB | 2eac_A | 2e-32 | 5 | 303 | 510 | 844 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
PDB | 2eab_B | 2e-32 | 5 | 303 | 510 | 844 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG890568 | 265 | 17 | 281 | 0 |
JG901756 | 257 | 87 | 343 | 0 |
GO876621 | 337 | 1 | 336 | 0 |
ES811142 | 299 | 2 | 300 | 0 |
JG890568 | 33 | 269 | 301 | 1.5 |
Sequence Alignments (This image is cropped. Click for full image.) |
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