| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00068426m |
| Family | GH29 |
| Protein Properties | Length: 463 Molecular Weight: 50514 Isoelectric Point: 7.9104 |
| Chromosome | Chromosome/Scaffold: 009803 Start: 263 End: 2131 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 42 | 316 | 0 |
| SAAQLRWQRREVIMFFHFGMNTFTDSEWGTGTEDPSLFRPAALDAAQWVRAARAAGASLAILVAKHHDGFCLWPSAYTDHSVRASPWRAGRGDVVREFVR AARAGGVDAGLYLSPWDRHDARYGKEVAYNEYYEAQLHELLTGYGSTVKQLQRSINIFSDDGPDVRWVGDEKGFAGSTCWSTVNRSMITIGEAGIEKYLN EGDPRGRDWVPPECDVSIRPGWFWHKNETAKPLRQLLEIYYNSVGRNCVLLLNAPPNTTGLVEDADVARLREFGS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 463 Download |
| MESPLLCLAF AAALAVGTLV PASEAWRPTA TLPPLPVLPV PSAAQLRWQR REVIMFFHFG 60 MNTFTDSEWG TGTEDPSLFR PAALDAAQWV RAARAAGASL AILVAKHHDG FCLWPSAYTD 120 HSVRASPWRA GRGDVVREFV RAARAGGVDA GLYLSPWDRH DARYGKEVAY NEYYEAQLHE 180 LLTGYGSTVK QLQRSINIFS DDGPDVRWVG DEKGFAGSTC WSTVNRSMIT IGEAGIEKYL 240 NEGDPRGRDW VPPECDVSIR PGWFWHKNET AKPLRQLLEI YYNSVGRNCV LLLNAPPNTT 300 GLVEDADVAR LREFGSAVAT IFGTDLAAGS AARASSERGG GFAARNVLDG RDDTYWAPTA 360 EDGRRNGYWI ELRRPAGSAG RPFNVVRIQE HVALGQRVER HAVYVDGAPV ANGTTVGHKR 420 LHRLPCAVAG RTVRVWIAAR RGPPLLSAVG LHHDPFVAAD AS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01120 | Alpha_L_fucos | 1.0e-11 | 106 | 315 | 242 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 4.0e-14 | 106 | 325 | 257 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 9.0e-33 | 45 | 326 | 318 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR35251.1 | 0 | 1 | 460 | 1 | 483 | unknown [Zea mays] |
| GenBank | EEC84898.1 | 0 | 43 | 458 | 45 | 489 | hypothetical protein OsI_32076 [Oryza sativa Indica Group] |
| RefSeq | NP_001063703.1 | 0 | 43 | 458 | 45 | 489 | Os09g0520800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151568.1 | 0 | 1 | 460 | 1 | 483 | alpha-L-fucosidase 1 [Zea mays] |
| RefSeq | XP_002462685.1 | 0 | 1 | 460 | 1 | 484 | hypothetical protein SORBIDRAFT_02g030220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 36 | 452 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 36 | 452 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ues_B | 0 | 41 | 447 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 41 | 447 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3mo4_B | 0 | 41 | 447 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
