Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00068552m |
Family | GH17 |
Protein Properties | Length: 368 Molecular Weight: 39789.6 Isoelectric Point: 9.7187 |
Chromosome | Chromosome/Scaffold: 008081 Start: 23 End: 1126 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 23 | 344 | 0 |
LGVNWGTMSTRRLPPKVVARLLADNGFRKVKIFDADERTMAGLAGTGIETMVAVPNDLLAAVADYDRAREWVKENVTRYAFDGGVDIRFVAVGNEPFLRA YNGSFDRVTVPALRNIQRALDEAGHGGRVKATVPVNADVYDSPPGDPVPSAGRFRADVAGVMAEMVRFLSRSGAPLTVNIYPFLSLYGNDDFPLDYAFFD GAGKAKPVVDGRVTYTNVFDANFDTLVSALKRVGFGHLPVMIGEVGWPTDGDRHATPALAERFYAGLLRRLAARKGTPLRPGARIEAYLFGLIDEDAKSV APGNFERHWGLFTFDGRPKFPL |
Full Sequence |
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Protein Sequence Length: 368 Download |
MAAFRCVLAS VLVAAAAMAA DALGVNWGTM STRRLPPKVV ARLLADNGFR KVKIFDADER 60 TMAGLAGTGI ETMVAVPNDL LAAVADYDRA REWVKENVTR YAFDGGVDIR FVAVGNEPFL 120 RAYNGSFDRV TVPALRNIQR ALDEAGHGGR VKATVPVNAD VYDSPPGDPV PSAGRFRADV 180 AGVMAEMVRF LSRSGAPLTV NIYPFLSLYG NDDFPLDYAF FDGAGKAKPV VDGRVTYTNV 240 FDANFDTLVS ALKRVGFGHL PVMIGEVGWP TDGDRHATPA LAERFYAGLL RRLAARKGTP 300 LRPGARIEAY LFGLIDEDAK SVAPGNFERH WGLFTFDGRP KFPLALRGGG GRPAMPVPAR 360 GVEYLPRR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 258 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-70 | 24 | 344 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG41694.1 | 0 | 21 | 368 | 26 | 371 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
GenBank | ACN32122.1 | 0 | 23 | 368 | 27 | 411 | unknown [Zea mays] |
RefSeq | NP_001068140.1 | 0 | 26 | 368 | 30 | 371 | Os11g0577800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140660.1 | 0 | 23 | 368 | 27 | 370 | hypothetical protein LOC100272735 [Zea mays] |
RefSeq | XP_002449743.1 | 0 | 26 | 368 | 29 | 373 | hypothetical protein SORBIDRAFT_05g022490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 344 | 2 | 313 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3f55_C | 0 | 23 | 344 | 2 | 313 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3f55_B | 0 | 23 | 344 | 2 | 313 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3f55_A | 0 | 23 | 344 | 2 | 313 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3em5_D | 0 | 23 | 344 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |