Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00068635m |
Family | GT43 |
Protein Properties | Length: 447 Molecular Weight: 50638 Isoelectric Point: 7.457 |
Chromosome | Chromosome/Scaffold: 008319 Start: 3179 End: 6742 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 214 | 422 | 0 |
LAHVLKNVPPPLLWIVAEWPYQSRETAEILRSSGVLYRHLICNRNTTNIRKIIVCQKNNAIFHIKKHRLDGIVHFADEERAYSVDLFEEMRKIRRFGTWP VAIHVGARYRVVLEGPLCRGNQVTGWHTNQRRGVPRRFPIGFSGFAFNSTILWDPQRWNSPTLESIILHSGGRGGLQESRFIEKLVEDETQMEGLADNCS RVMVWNFDL |
Full Sequence |
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Protein Sequence Length: 447 Download |
MARRNAGAMP REGSAGSVKD WSEFDPSPSP KLAYSHSYVA MRGLLTSVAS LDPILMSSSL 60 KSLWAALSSH RHARSLERPK SKGVNWRRPM VHLLVCFLVG IFIGFTPPFS VDLSDKIDSE 120 NEMLPFDGDV VDRQMLELKS TKLEPFAAET EAVEEQQVDE SPPVPAMLDD EVDFIEASHI 180 VPSVNDSDFV VRKQLIIVTA TSVRPHQAYY LNRLAHVLKN VPPPLLWIVA EWPYQSRETA 240 EILRSSGVLY RHLICNRNTT NIRKIIVCQK NNAIFHIKKH RLDGIVHFAD EERAYSVDLF 300 EEMRKIRRFG TWPVAIHVGA RYRVVLEGPL CRGNQVTGWH TNQRRGVPRR FPIGFSGFAF 360 NSTILWDPQR WNSPTLESII LHSGGRGGLQ ESRFIEKLVE DETQMEGLAD NCSRVMVWNF 420 DLEPPQLHYP TGWLLQKNLD AVVPIT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 7.0e-57 | 214 | 418 | 214 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 1.0e-71 | 75 | 432 | 369 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 2.0e-92 | 195 | 424 | 236 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI93179.1 | 0 | 2 | 446 | 4 | 448 | glycosyltransferase [Saccharum officinarum] |
GenBank | EAY75350.1 | 0 | 1 | 446 | 1 | 446 | hypothetical protein OsI_03246 [Oryza sativa Indica Group] |
RefSeq | NP_001043846.1 | 0 | 1 | 446 | 1 | 446 | Os01g0675500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151473.1 | 0 | 1 | 446 | 1 | 448 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [Zea mays] |
RefSeq | XP_002458309.1 | 0 | 1 | 446 | 1 | 448 | hypothetical protein SORBIDRAFT_03g030990 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 2e-22 | 197 | 427 | 7 | 238 | B Chain B, Crystal Structure Of Xeg-Edgp |
PDB | 1v84_A | 2e-22 | 197 | 427 | 7 | 238 | B Chain B, Crystal Structure Of Xeg-Edgp |
PDB | 1v83_B | 2e-22 | 197 | 427 | 7 | 238 | B Chain B, Crystal Structure Of Xeg-Edgp |
PDB | 1v83_A | 2e-22 | 197 | 427 | 7 | 238 | B Chain B, Crystal Structure Of Xeg-Edgp |
PDB | 1v82_B | 2e-22 | 197 | 427 | 7 | 238 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |