| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00068709m |
| Family | GH1 |
| Protein Properties | Length: 330 Molecular Weight: 37493.4 Isoelectric Point: 9.7496 |
| Chromosome | Chromosome/Scaffold: 0100490 Start: 646 End: 1799 |
| Description | beta glucosidase 17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 1 | 327 | 0 |
| VCFREFGDRVKFWATFNEPWSFASQGYGTGALAPGRCSPFISKSCTPGDSGREPYVVTHHILLAHAAAVALYRPRYQAAQRGQVGITLPSHWFVPNTDTA ADRRAVQRSLDYMYGWYLGPLVHGEYPGTMTGFLGDRLPRFTPEQRRLVRGSYDFIGVNYYTTYSASARPAPDGPAQSYDGDILANTSGFRGGEPFGEPE FVPIFFNSPAGLRELLLYTKRRYNNPVIYVTENGIAEGNSARIPLKKALKDGHRIKFHSQHLQFINHAIRDGVKVKGYFTWTFMDCFEWGDGYFDRFGLI FIDRLNGLKRYRKQSSYWIESFLKRNK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 330 Download |
| VCFREFGDRV KFWATFNEPW SFASQGYGTG ALAPGRCSPF ISKSCTPGDS GREPYVVTHH 60 ILLAHAAAVA LYRPRYQAAQ RGQVGITLPS HWFVPNTDTA ADRRAVQRSL DYMYGWYLGP 120 LVHGEYPGTM TGFLGDRLPR FTPEQRRLVR GSYDFIGVNY YTTYSASARP APDGPAQSYD 180 GDILANTSGF RGGEPFGEPE FVPIFFNSPA GLRELLLYTK RRYNNPVIYV TENGIAEGNS 240 ARIPLKKALK DGHRIKFHSQ HLQFINHAIR DGVKVKGYFT WTFMDCFEWG DGYFDRFGLI 300 FIDRLNGLKR YRKQSSYWIE SFLKRNKTH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 1.0e-59 | 1 | 328 | 336 | + beta-glucosidase | ||
| TIGR03356 | BGL | 1.0e-59 | 1 | 318 | 327 | + beta-galactosidase. | ||
| PLN02814 | PLN02814 | 2.0e-60 | 1 | 324 | 325 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 2.0e-62 | 2 | 329 | 336 | + beta-glucosidase | ||
| pfam00232 | Glyco_hydro_1 | 1.0e-81 | 1 | 327 | 330 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A3C053 | 0 | 1 | 327 | 167 | 493 | BGL29_ORYSJ RecName: Full=Beta-glucosidase 29; Short=Os9bglu29; Flags: Precursor |
| GenBank | EAZ09573.1 | 0 | 1 | 326 | 178 | 500 | hypothetical protein OsI_31852 [Oryza sativa Indica Group] |
| GenBank | EEC84793.1 | 0 | 1 | 327 | 185 | 511 | hypothetical protein OsI_31851 [Oryza sativa Indica Group] |
| RefSeq | NP_001063538.1 | 0 | 1 | 327 | 178 | 504 | Os09g0490400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002462569.1 | 0 | 1 | 325 | 180 | 505 | hypothetical protein SORBIDRAFT_02g028400 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 0 | 1 | 325 | 181 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3ptq_A | 0 | 1 | 325 | 181 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3ptm_B | 0 | 1 | 325 | 181 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3ptm_A | 0 | 1 | 325 | 181 | 505 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3ptk_B | 0 | 1 | 325 | 181 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EE590590 | 327 | 1 | 327 | 0 |
| FL720309 | 224 | 106 | 329 | 0 |
| FL713967 | 251 | 75 | 325 | 0 |
| FE647592 | 260 | 50 | 308 | 0 |
| JG903945 | 221 | 105 | 325 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |