y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00068769m |
Family | GH17 |
Protein Properties | Length: 306 Molecular Weight: 31547.9 Isoelectric Point: 4.7098 |
Chromosome | Chromosome/Scaffold: 009629 Start: 11087 End: 12982 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 302 | 0 |
IGINYGDVADNLPPPSSTARLIQSTTISKVRLYGTDPAVVSAFAGTGISLLLGAANGDIANLASSPAAAAAWVAAHIPASSPAVSTVSIGNEVLFADASL ASQLVPAMQNLYSALPPNSSIKVSTVHAMDVLASSDPPSSGAFKPELDAALDPVLAFLSKTGSPFLINPYPYFAYLSDPRPETLAFCLFQPNAGRPDAGS GLTYTNMLDAMLDAVRAALDAKGYKDVEIVVAETGWPHKGDPDEAGATPENARAFVSGLVSHLRSLAGTPRVPG |
Full Sequence |
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Protein Sequence Length: 306 Download |
MAERAWVVLA LLGAVQLLRL PLAAPQSFIG INYGDVADNL PPPSSTARLI QSTTISKVRL 60 YGTDPAVVSA FAGTGISLLL GAANGDIANL ASSPAAAAAW VAAHIPASSP AVSTVSIGNE 120 VLFADASLAS QLVPAMQNLY SALPPNSSIK VSTVHAMDVL ASSDPPSSGA FKPELDAALD 180 PVLAFLSKTG SPFLINPYPY FAYLSDPRPE TLAFCLFQPN AGRPDAGSGL TYTNMLDAML 240 DAVRAALDAK GYKDVEIVVA ETGWPHKGDP DEAGATPENA RAFVSGLVSH LRSLAGTPRV 300 PGKSVD 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 56 | 293 | 244 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-68 | 29 | 305 | 282 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE59830.1 | 0 | 13 | 306 | 15 | 293 | hypothetical protein OsJ_12394 [Oryza sativa Japonica Group] |
RefSeq | NP_001051111.1 | 0 | 13 | 306 | 15 | 309 | Os03g0722500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147326.1 | 0 | 10 | 306 | 11 | 307 | LOC100280934 [Zea mays] |
RefSeq | NP_001150853.1 | 0 | 19 | 306 | 21 | 308 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466550.1 | 0 | 20 | 306 | 23 | 309 | hypothetical protein SORBIDRAFT_01g009770 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 306 | 1 | 277 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 29 | 299 | 1 | 264 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 29 | 299 | 1 | 264 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 29 | 306 | 2 | 280 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 29 | 306 | 2 | 280 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |