| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00069158m |
| Family | AA1 |
| Protein Properties | Length: 623 Molecular Weight: 69481.5 Isoelectric Point: 6.6104 |
| Chromosome | Chromosome/Scaffold: 009609 Start: 9316 End: 12722 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 29 | 595 | 0 |
| ASVIEHTFVVSQMKMTHLCKETPVTVVNGQLPGPVIDVTEGDSVVVHVVNKSPYNITIHWHGVKQWLNCWADGVPMITQYPIQPNHNFTYRLNITGQEGT LWWHAHVPGFRATVHGAFIIRPRHGASSYPFPKPDKEIPVIIGDWWNMDLALLEKHFEKELVDDLPVAATINGKLGDLYNCSGVVEDGYVLDVEPGKTYL LRIINAVLFSEYYLKVAGHKFTVVAADAHYVNPYTTDVIAVAPGETVDALMVADAPHGRYYMVALPNQAPLPDPQIPVFVTRGIVRYKYDNNHGEEEGDP SNDAPMVPEMPDQHDTITSFYFHGNLTSLHRPHRRTKVPAQADEHMFITLGLGSFCPHGRSCKERWIWNSMGAATMNNVSFQLPTHLAVPLLEAEYYHCN STTSSSDDGIKFYTLPDNPPELYDFTNPALTPDAAATALLQRTIRAAAIRRFRYGTVVDIVFQSTSLLQTDSNPMHLHGHDMFVLAQGRGNYNASRDVAR YNLVDPPLKNTVLVPRIGWVAIRFVADNPGVWFMHCHFEFHMMMGMAAVFIVEDGPTVDSVLPPPPL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 623 Download |
| MKTRRVLTAI TMAVFFFFFS ATALPAVAAS VIEHTFVVSQ MKMTHLCKET PVTVVNGQLP 60 GPVIDVTEGD SVVVHVVNKS PYNITIHWHG VKQWLNCWAD GVPMITQYPI QPNHNFTYRL 120 NITGQEGTLW WHAHVPGFRA TVHGAFIIRP RHGASSYPFP KPDKEIPVII GDWWNMDLAL 180 LEKHFEKELV DDLPVAATIN GKLGDLYNCS GVVEDGYVLD VEPGKTYLLR IINAVLFSEY 240 YLKVAGHKFT VVAADAHYVN PYTTDVIAVA PGETVDALMV ADAPHGRYYM VALPNQAPLP 300 DPQIPVFVTR GIVRYKYDNN HGEEEGDPSN DAPMVPEMPD QHDTITSFYF HGNLTSLHRP 360 HRRTKVPAQA DEHMFITLGL GSFCPHGRSC KERWIWNSMG AATMNNVSFQ LPTHLAVPLL 420 EAEYYHCNST TSSSDDGIKF YTLPDNPPEL YDFTNPALTP DAAATALLQR TIRAAAIRRF 480 RYGTVVDIVF QSTSLLQTDS NPMHLHGHDM FVLAQGRGNY NASRDVARYN LVDPPLKNTV 540 LVPRIGWVAI RFVADNPGVW FMHCHFEFHM MMGMAAVFIV EDGPTVDSVL PPPPLNHPKC 600 GHVHSLKSNE LYLMDNKVVS PA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 3.0e-46 | 37 | 153 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-58 | 21 | 560 | 573 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-60 | 8 | 560 | 581 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-68 | 47 | 560 | 550 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 7.0e-172 | 29 | 600 | 576 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001064399.1 | 0 | 33 | 594 | 42 | 596 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130676.1 | 0 | 29 | 583 | 26 | 578 | hypothetical protein LOC100191779 [Zea mays] |
| RefSeq | NP_001146681.1 | 0 | 33 | 583 | 42 | 585 | hypothetical protein LOC100280281 [Zea mays] |
| RefSeq | XP_002449982.1 | 0 | 29 | 583 | 29 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 29 | 602 | 28 | 595 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 578 | 1 | 521 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
| PDB | 1asq_A | 0 | 29 | 578 | 1 | 521 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
| PDB | 1asp_B | 0 | 29 | 578 | 1 | 521 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
| PDB | 1asp_A | 0 | 29 | 578 | 1 | 521 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
| PDB | 1aso_B | 0 | 29 | 578 | 1 | 521 | A Chain A, Glutathionylspermidine SynthetaseAMIDASE C59A COMPLEX WITH ADP AND Gsp |
