Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00069222m |
Family | AA1 |
Protein Properties | Length: 560 Molecular Weight: 62173.8 Isoelectric Point: 8.5939 |
Chromosome | Chromosome/Scaffold: 009892 Start: 190 End: 2716 |
Description | SKU5 similar 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 49 | 510 | 0 |
QKVILINGEFPGPRINCSSNNNIVINVFNQLDQPLLFTWNGMQHRKNSWMDGLPGTQCPIAPNTNFTYKWQPKDQIGSFFYFPSVGMQRAAGGYGAITVV SRLLIPVPFDQPPPESDHVVLAGDWYTKDHEVMARLLDAGRTVGRPNGVLINGRGGKDLAAGPPVFTFEAGKTYRLRVCNTGIKASLNFRIQGHDMKLVE MDGSHTVQDMYDSLDVHVGHCFSVLVDADQKPGDYYLVASTRFIHDARSASAIIRYAGSSTPPSSNVPEPPAGWAWSLNQWRSFRWNLTASAARPNPQGS YHYGQINITRTIKLMVTRGYVDGKLRYGFNGVSHRDADTPLKLAEYFNVTDGVFSYNQMGDVPPAVNGPLHVIPNVITAEFRTFIEVVFENPEKSMDSFH LDGYAFFAVGMGPGKWSPELRKTYNLLDAVSRHTVQVYPRSWSAIMLTFDNAGMWNIRSNIW |
Full Sequence |
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Protein Sequence Length: 560 Download |
MNMATTARVA AGVLLVLSAL ALQAGAEDPY LFFEWKVTYG TKTLLGAPQK VILINGEFPG 60 PRINCSSNNN IVINVFNQLD QPLLFTWNGM QHRKNSWMDG LPGTQCPIAP NTNFTYKWQP 120 KDQIGSFFYF PSVGMQRAAG GYGAITVVSR LLIPVPFDQP PPESDHVVLA GDWYTKDHEV 180 MARLLDAGRT VGRPNGVLIN GRGGKDLAAG PPVFTFEAGK TYRLRVCNTG IKASLNFRIQ 240 GHDMKLVEMD GSHTVQDMYD SLDVHVGHCF SVLVDADQKP GDYYLVASTR FIHDARSASA 300 IIRYAGSSTP PSSNVPEPPA GWAWSLNQWR SFRWNLTASA ARPNPQGSYH YGQINITRTI 360 KLMVTRGYVD GKLRYGFNGV SHRDADTPLK LAEYFNVTDG VFSYNQMGDV PPAVNGPLHV 420 IPNVITAEFR TFIEVVFENP EKSMDSFHLD GYAFFAVGMG PGKWSPELRK TYNLLDAVSR 480 HTVQVYPRSW SAIMLTFDNA GMWNIRSNIW ERHYLGEQLY MSVMSPARSL RDEYNMPDNA 540 LRCGKVVGLP LPPSYAPAR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 27 | 557 | 531 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 27 | 548 | 523 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 27 | 548 | 522 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 27 | 545 | 523 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 29 | 546 | 530 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86554.2 | 0 | 3 | 559 | 1 | 559 | unknown [Zea mays] |
GenBank | ACN26659.1 | 0 | 12 | 559 | 13 | 559 | unknown [Zea mays] |
RefSeq | NP_001055876.1 | 0 | 26 | 558 | 27 | 556 | Os05g0485800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151772.1 | 0 | 3 | 559 | 1 | 559 | pollen-specific protein NTP303 [Zea mays] |
RefSeq | NP_001151961.1 | 0 | 12 | 559 | 13 | 559 | pollen-specific protein NTP303 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 33 | 544 | 6 | 539 | A Chain A, Engineering Domain-Swapped Binding Interfaces By Mutually Exclusive Folding: Insertion Of Ubiquitin Into Position 103 Of Barn |
PDB | 1asq_A | 0 | 33 | 544 | 6 | 539 | A Chain A, Engineering Domain-Swapped Binding Interfaces By Mutually Exclusive Folding: Insertion Of Ubiquitin Into Position 103 Of Barn |
PDB | 1asp_B | 0 | 33 | 544 | 6 | 539 | A Chain A, Engineering Domain-Swapped Binding Interfaces By Mutually Exclusive Folding: Insertion Of Ubiquitin Into Position 103 Of Barn |
PDB | 1asp_A | 0 | 33 | 544 | 6 | 539 | A Chain A, Engineering Domain-Swapped Binding Interfaces By Mutually Exclusive Folding: Insertion Of Ubiquitin Into Position 103 Of Barn |
PDB | 1aso_B | 0 | 33 | 544 | 6 | 539 | A Chain A, Engineering Domain-Swapped Binding Interfaces By Mutually Exclusive Folding: Insertion Of Ubiquitin Into Position 103 Of Barn |