| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00069223m |
| Family | GT8 |
| Protein Properties | Length: 632 Molecular Weight: 71067.9 Isoelectric Point: 6.0783 |
| Chromosome | Chromosome/Scaffold: 009892 Start: 5296 End: 11130 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 302 | 603 | 0 |
| CLSMRLTVDYFNASSDMEHSDAEKFGNPAFQHHVIFSTNLLASSMTINSSVINSEESANMVFHLMTDGQNFYAFKNWFIRNSYKGATIRVLNFEYLQMKN LGNGIVDQLSPSEEFRITSNSNALTLNTLTRTEYISMFGHSLFLLPELFTNLKRVIVLEDDTIVQRDLSLLWNLDLKGKVIGAVQFCQVKFHQLRAYLPD FPYNSSSCIWMSGVSIIDLDEWREHDVTGIHHRILEKLRHDTEASWRSAALPAGLLAFQNLIHPIEGQWVQFGLGHDYGLAHGAIKKAAILHYNGNMKPW LE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 632 Download |
| MKGPGTAAGS AAPAGKRRWR CVAAAGAAVA LAFFSVVVPL AVLLGLHARF PSMYLVDESA 60 VSVYDGSEGG SWEPIPTEEN DTLQVNNTVK EFVLPTPKEW TNTNGSQSDT VIGNISIHPA 120 SPIQQDTVLE NSSLLNLLQI TGTYLRDSFE QGLPGDENGK SCQLEFGSYC LWSVEHEEVM 180 KDFIVKRLKD QLFVARAYYP SIVKLDGMEN LSHEMKQNIQ EHGHMLSEAI SDADLPELHR 240 VNMAKMDQTI AAAKSCDAEC TNVEKKLTQL LDMTEDEALF HARQSAYLYR LGVQTLPKSL 300 HCLSMRLTVD YFNASSDMEH SDAEKFGNPA FQHHVIFSTN LLASSMTINS SVINSEESAN 360 MVFHLMTDGQ NFYAFKNWFI RNSYKGATIR VLNFEYLQMK NLGNGIVDQL SPSEEFRITS 420 NSNALTLNTL TRTEYISMFG HSLFLLPELF TNLKRVIVLE DDTIVQRDLS LLWNLDLKGK 480 VIGAVQFCQV KFHQLRAYLP DFPYNSSSCI WMSGVSIIDL DEWREHDVTG IHHRILEKLR 540 HDTEASWRSA ALPAGLLAFQ NLIHPIEGQW VQFGLGHDYG LAHGAIKKAA ILHYNGNMKP 600 WLELGIHRYK KYWKRYLPRD DVFMMDCNVN P* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02718 | PLN02718 | 3.0e-87 | 173 | 629 | 477 | + Probable galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 7.0e-88 | 333 | 617 | 285 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02910 | PLN02910 | 3.0e-103 | 167 | 630 | 482 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 4.0e-110 | 179 | 631 | 472 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 16 | 630 | 626 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT01328.1 | 0 | 16 | 631 | 13 | 667 | putative glycosyltransferase [Oryza sativa Japonica Group] |
| GenBank | EEC79421.1 | 0 | 16 | 631 | 13 | 637 | hypothetical protein OsI_20392 [Oryza sativa Indica Group] |
| GenBank | EEE64154.1 | 0 | 16 | 631 | 13 | 637 | hypothetical protein OsJ_18986 [Oryza sativa Japonica Group] |
| RefSeq | XP_002441280.1 | 0 | 1 | 631 | 1 | 638 | hypothetical protein SORBIDRAFT_09g023760 [Sorghum bicolor] |
| RefSeq | XP_002441763.1 | 0 | 146 | 630 | 167 | 654 | hypothetical protein SORBIDRAFT_08g002010 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.01 | 434 | 540 | 77 | 181 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.01 | 434 | 540 | 77 | 181 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.01 | 434 | 540 | 77 | 181 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
