Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00069320m |
Family | GT43 |
Protein Properties | Length: 386 Molecular Weight: 43236.4 Isoelectric Point: 9.9276 |
Chromosome | Chromosome/Scaffold: 009701 Start: 9711 End: 12712 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 151 | 359 | 0 |
MGQTLRLVDPPLLWVVVQAGKPTPEAAAALRRTAVMHRYVGCCDRLNASSDDLRPHQMNAALELVENHRLDGIVYFAHEEGVYSLALFQRLRRIRRFGTW PVPVISENRKDGVVLEGPVCKQNQVVGWHTSEDNSKLRRFHVAMSGFAFNSTMLWDPKLRSHVAWNSIRHPEMVKEGLQGTTFVEQLVEDESQMEGIPAD CSHIMNWHV |
Full Sequence |
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Protein Sequence Length: 386 Download |
MASIRRPHSP AKQHLLRHHH PFASSSPPSS PLRHSSSSSS SPRTHQHHLA AGYPHPFLFL 60 SRRPLPRFAA FFLLGSFLGL LHFLSHLPHT PHIGPADSSP NPVASASDLR HQLPIWVQDD 120 DAAADDGRKK LLIVVTPTRA RAAQAYYLSR MGQTLRLVDP PLLWVVVQAG KPTPEAAAAL 180 RRTAVMHRYV GCCDRLNASS DDLRPHQMNA ALELVENHRL DGIVYFAHEE GVYSLALFQR 240 LRRIRRFGTW PVPVISENRK DGVVLEGPVC KQNQVVGWHT SEDNSKLRRF HVAMSGFAFN 300 STMLWDPKLR SHVAWNSIRH PEMVKEGLQG TTFVEQLVED ESQMEGIPAD CSHIMNWHVP 360 FGSENLAYPK GWRVGTNLDV IIPLK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 1.0e-51 | 151 | 358 | 216 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 1.0e-54 | 129 | 361 | 238 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 1.0e-71 | 130 | 358 | 236 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE12013.1 | 0 | 127 | 385 | 16 | 276 | beta3-glucuronyltransferase [Hordeum vulgare] |
EMBL | CAH65757.1 | 0 | 1 | 385 | 1 | 381 | OSIGBa0123D13.6 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001051997.1 | 0 | 1 | 385 | 1 | 381 | Os04g0103100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131482.1 | 0 | 1 | 385 | 1 | 387 | hypothetical protein LOC100192819 [Zea mays] |
RefSeq | XP_002446005.1 | 0 | 1 | 385 | 1 | 385 | hypothetical protein SORBIDRAFT_06g000430 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 2e-19 | 134 | 359 | 7 | 231 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v84_A | 2e-19 | 134 | 359 | 7 | 231 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v83_B | 2e-19 | 134 | 359 | 7 | 231 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v83_A | 2e-19 | 134 | 359 | 7 | 231 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v82_B | 2e-19 | 134 | 359 | 7 | 231 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT646301 | 232 | 130 | 353 | 0 |
EE046269 | 192 | 197 | 386 | 0 |
EB658211 | 148 | 239 | 386 | 0 |
DR164049 | 257 | 129 | 385 | 0 |
EB658200 | 145 | 242 | 386 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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