Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00069435m |
Family | GT90 |
Protein Properties | Length: 441 Molecular Weight: 50712.9 Isoelectric Point: 8.3502 |
Chromosome | Chromosome/Scaffold: 009630 Start: 9113 End: 10714 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 133 | 368 | 0 |
RVPDLDIMFACDDPGQVRAADFPTPSQAPPVFRYCKDASTLDIVFPDWSFWGWPEVGIRPWTQMLEVRQENERVRWPERQPYAFWKGNPEGYRIRHELLR CNASNGQEWNVRVFTQNWNHAIQNGFKDSRIPKQCIYRYKVYMEGNAWSVSEKYILACDSPVLFITTPFQDILSRGLVAGKHYWPINQEHVCKSIKFAVR LIGQQGSWFVREEMSMDYIYDYMLHLLTEYAKLLRY |
Full Sequence |
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Protein Sequence Length: 441 Download |
SSLLGNTVSI GAGQRRRHHS NSTAPLVPIP FTCGNETTPQ PLKCPATGTP ARRLPAGGPA 60 PSCPDYFRYI DLRPWRGSGI TREAVERARP HAYFRLVVVG GRAYVETYHR AYQTRDVFTQ 120 WVILQLIRRY PGRVPDLDIM FACDDPGQVR AADFPTPSQA PPVFRYCKDA STLDIVFPDW 180 SFWGWPEVGI RPWTQMLEVR QENERVRWPE RQPYAFWKGN PEGYRIRHEL LRCNASNGQE 240 WNVRVFTQNW NHAIQNGFKD SRIPKQCIYR YKVYMEGNAW SVSEKYILAC DSPVLFITTP 300 FQDILSRGLV AGKHYWPINQ EHVCKSIKFA VRLIGQQGSW FVREEMSMDY IYDYMLHLLT 360 EYAKLLRYKP TVPEKAVEIC TESIACPAQG LHRDCMMDSM ERHVASFEPC TLPPQFTPEE 420 AKGIADREAD VLRKVENMEG * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 1.0e-40 | 334 | 439 | 106 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 3.0e-86 | 62 | 221 | 164 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 3.0e-86 | 133 | 369 | 256 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD69335.1 | 0 | 18 | 420 | 97 | 519 | unknown protein [Oryza sativa Japonica Group] |
RefSeq | NP_001056838.1 | 0 | 18 | 420 | 102 | 524 | Os06g0152700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060764.1 | 0 | 11 | 438 | 121 | 571 | Os08g0101800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002437850.1 | 0 | 2 | 440 | 93 | 552 | hypothetical protein SORBIDRAFT_10g003730 [Sorghum bicolor] |
RefSeq | XP_002443683.1 | 0 | 1 | 438 | 106 | 588 | hypothetical protein SORBIDRAFT_07g000280 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO180311 | 235 | 116 | 339 | 0 |
HO127770 | 227 | 121 | 336 | 0 |
HO179717 | 213 | 237 | 439 | 0 |
FE611034 | 158 | 92 | 248 | 0 |
EX132718 | 292 | 123 | 398 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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