y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00069461m |
Family | CE10 |
Protein Properties | Length: 300 Molecular Weight: 32161.6 Isoelectric Point: 5.706 |
Chromosome | Chromosome/Scaffold: 008101 Start: 8721 End: 11534 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 46 | 295 | 0 |
VQWKDVVYDAARGLRLRMYRPTGEQQQKLPVLVYFHGGGFCVASFELVNYHDGALRLAAELPALVLSADYRLAPEHRLPAAFDDADSVLAWLRAQASAAA EPWLAESADFGRVFVGGDSAGGTISHHDPTPSEVACPPVEPLGTALFHQMWRLALPPGATMDHPFANPPAPGAVPFDRLGDGGAFPPPVLVVDPDQDVLH DRVVEYVARLKAAGKAAVELVVFAGQGHGFFVREPCGQASDELIRVVRRF |
Full Sequence |
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Protein Sequence Length: 300 Download |
MSSPRAPHVV EDCLGIVQLL SDGTVRRSTD YSVFPLLGGV PTGLHVQWKD VVYDAARGLR 60 LRMYRPTGEQ QQKLPVLVYF HGGGFCVASF ELVNYHDGAL RLAAELPALV LSADYRLAPE 120 HRLPAAFDDA DSVLAWLRAQ ASAAAEPWLA ESADFGRVFV GGDSAGGTIS HHDPTPSEVA 180 CPPVEPLGTA LFHQMWRLAL PPGATMDHPF ANPPAPGAVP FDRLGDGGAF PPPVLVVDPD 240 QDVLHDRVVE YVARLKAAGK AAVELVVFAG QGHGFFVREP CGQASDELIR VVRRFVHGE* 300 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.001 | 59 | 119 | 62 | + Carboxylesterase family. | ||
COG2272 | PnbA | 6.0e-6 | 58 | 170 | 119 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 1.0e-8 | 62 | 170 | 110 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 1.0e-21 | 18 | 295 | 304 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 5.0e-36 | 77 | 276 | 231 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR37878.1 | 0 | 6 | 296 | 15 | 335 | unknown [Zea mays] |
GenBank | EAZ02865.1 | 0 | 4 | 297 | 8 | 334 | hypothetical protein OsI_24996 [Oryza sativa Indica Group] |
RefSeq | NP_001058949.1 | 0 | 4 | 297 | 8 | 333 | Os07g0162600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002461497.1 | 0 | 8 | 299 | 16 | 325 | hypothetical protein SORBIDRAFT_02g003580 [Sorghum bicolor] |
RefSeq | XP_002462164.1 | 0 | 6 | 298 | 14 | 338 | hypothetical protein SORBIDRAFT_02g020810 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 2e-30 | 46 | 296 | 53 | 327 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
PDB | 2o7r_A | 2e-30 | 46 | 296 | 53 | 327 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 9e-20 | 50 | 277 | 66 | 329 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 9e-20 | 50 | 277 | 66 | 329 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 9e-20 | 50 | 277 | 66 | 329 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR823018 | 286 | 48 | 293 | 0 |
EE189077 | 260 | 1 | 213 | 0 |
FE647660 | 231 | 2 | 192 | 0 |
DR972882 | 264 | 1 | 226 | 0 |
DT642831 | 254 | 6 | 221 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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