CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00069636m
FamilyGH16
Protein PropertiesLength: 300 Molecular Weight: 33127.4 Isoelectric Point: 5.6354
ChromosomeChromosome/Scaffold: 009274 Start: 1571 End: 2843
Descriptionxyloglucan endotransglucosylase/hydrolase 1
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16572193.3e-22
  KLILDRSSGAGFRSKSIYGSGLFHMRMKIPSGNTAGVVTTFYLISQPENGGHDEIDFEFLGDKAGRPVTLQTNLIIDGQSYREQWLRLWFDPAAAFHDYK
  ILWNAYQLVMFVDDTPVRVLRNLTAAVPGYPFPSKPAMLIRGSIWDGSSWATDGGRAKLDWSR
Full Sequence
Protein Sequence     Length: 300     Download
MASKVRPSLL LRLVVVVLAA TVASFARAAV VPVFDESYEA QYGADGHHLI NRGTEVKLIL    60
DRSSGAGFRS KSIYGSGLFH MRMKIPSGNT AGVVTTFYLI SQPENGGHDE IDFEFLGDKA    120
GRPVTLQTNL IIDGQSYREQ WLRLWFDPAA AFHDYKILWN AYQLVMFVDD TPVRVLRNLT    180
AAVPGYPFPS KPAMLIRGSI WDGSSWATDG GRAKLDWSRA PFTAAFRGFD VDAACAVGNV    240
TPPCYDDPAA LWWNGGEYEA LSDAQRAAYE SVRNNSMVYD YCTDELRFNS HVPLECSYV*    300

Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02183GH16_fungal_CRH1_transglycosylase4.0e-1891231153+
cd02175GH16_lichenase1.0e-1864217163+
pfam00722Glyco_hydro_161.0e-5534219187+
PLN03161PLN031612.0e-7434297265+
cd02176GH16_XET3.0e-12434296263+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_001057249.1033299482748Os06g0237400 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001150467.103429840301xyloglucan endotransglucosylase/hydrolase protein 1 [Zea mays]
RefSeqXP_002438131.103929836289hypothetical protein SORBIDRAFT_10g008540 [Sorghum bicolor]
RefSeqXP_002438132.101529811292hypothetical protein SORBIDRAFT_10g008550 [Sorghum bicolor]
RefSeqXP_002521076.10132968283Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B0222973273A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase
PDB1un1_A0222973273A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase
PDB1umz_B0222973273A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A0222973273A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B03429620267A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Transmembrane Domains
StartEnd
931
Signal Peptide
Cleavage Site
28
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CJ655637224332540
CJ655203196332260
CD893542174332060
EE260191242332720
EV529686259332900
Orthologous Group
SpeciesID
Arabidopsis lyrata884593899104485216359038359039
883627883616
Arabidopsis thalianaAT4G13090.1AT3G25050.1AT3G48580.1AT4G13080.1
Brachypodium distachyonBradi1g44777.1Bradi1g71937.1
Brassica rapaBra001434Bra015093Bra001433
Carica papayaevm.model.supercontig_8.136
Capsella rubellaCarubv10016385mCarubv10005358mCarubv10006916mCarubv10006944mCarubv10018461m
Citrus clementinaCiclev10033360mCiclev10023425m
Citrus sinensisorange1.1g042925morange1.1g041460m
Cucumis sativusCucsa.067150.1
Eucalyptus grandisEucgr.H00787.1Eucgr.H00788.1Eucgr.K02717.1Eucgr.K02715.1
Fragaria vescamrna17598.1-v1.0-hybrid
Glycine maxGlyma18g35720.2Glyma18g35720.1Glyma08g46450.1
Gossypium raimondiiGorai.007G155700.1Gorai.004G226400.1
Linum usitatissimumLus10032879Lus10025919Lus10038182Lus10022784Lus10011845
Lus10022782
Malus domesticaMDP0000311020
Manihot esculentacassava4.1_032567m
Medicago truncatulaMedtr2g049030.1Medtr2g049130.1
Mimulus guttatusmgv1a010995mmgv1a011712mmgv1a020473mmgv1a011649mmgv1a025665m
mgv1a019895mmgv1a020281mmgv1a021895mmgv1a011700mmgv1a010970m
Oryza sativaLOC_Os06g13040.1
Panicum virgatumPavirv00044296mPavirv00046059m
Phaseolus vulgarisPhvul.008G129900.1Phvul.008G129100.1
Picea abiesMA_300041g0010MA_10083496g0010MA_254951g0010
Populus trichocarpaPotri.002G244200.1
Prunus persicappa019741mppa027154m
Ricinus communis30204.m00174129904.m002924
Setaria italicaSi007117mSi006999m
Selaginella moellendorffii403283
Sorghum bicolorSb10g008540.1Sb10g008550.1
Thellungiella halophilaThhalv10002629mThhalv10010620mThhalv10026812m
Vitis viniferaGSVIVT01003280001GSVIVT01004746001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny