| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00069761m |
| Family | CE16 |
| Protein Properties | Length: 392 Molecular Weight: 41193.6 Isoelectric Point: 8.2505 |
| Chromosome | Chromosome/Scaffold: 009164 Start: 2046 End: 5547 |
| Description | GDSL-like Lipase/Acylhydrolase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 136 | 382 | 2.2e-24 |
| AQSNNKSLLHGANFASGAAGYLDATAALYGAISLSRQADYFREYQSRVAASAGEQRAKALTSGSIYVVSAGTSDYVQNYYVNPVLGAAYAPDQFADALMQ PFTSFVERLYSLGARRIGVTSLPPMGCLPASVTLFGGGNPGCVERLNNDSLTFNRKLGAAADAVKRRRPDLKLVVFDIYQPLLDLVNNPTSAGFFESRRA CCGTGTIETSVLCHQGAPGTCSNATGYVFWDGFHPTDAANRVLADAL | |||
| Full Sequence |
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| Protein Sequence Length: 392 Download |
| PHPPRSPLLA PQLATAEGNR PAFAYASRAR TMKLSSAVPA ASASAVMLMV LSAAAATARG 60 QALVPGVMIF GDSVVDAGNN NRLATLVRAD FPPYGRDFPA THAPTGRFCN GKLATDYTVE 120 NLGLSSYPPA YLSEEAQSNN KSLLHGANFA SGAAGYLDAT AALYGAISLS RQADYFREYQ 180 SRVAASAGEQ RAKALTSGSI YVVSAGTSDY VQNYYVNPVL GAAYAPDQFA DALMQPFTSF 240 VERLYSLGAR RIGVTSLPPM GCLPASVTLF GGGNPGCVER LNNDSLTFNR KLGAAADAVK 300 RRRPDLKLVV FDIYQPLLDL VNNPTSAGFF ESRRACCGTG TIETSVLCHQ GAPGTCSNAT 360 GYVFWDGFHP TDAANRVLAD ALLLQGLQLI A* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam00657 | Lipase_GDSL | 1.0e-13 | 138 | 377 | 246 | + GDSL-like Lipase/Acylhydrolase. |
| COG3240 | COG3240 | 1.0e-14 | 70 | 376 | 316 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] |
| cd01846 | fatty_acyltransferase_like | 2.0e-34 | 69 | 377 | 312 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. |
| PLN03156 | PLN03156 | 4.0e-102 | 57 | 377 | 322 | + GDSL esterase/lipase; Provisional |
| cd01837 | SGNH_plant_lipase_like | 5.0e-132 | 65 | 377 | 313 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG38766.1 | 0 | 61 | 391 | 30 | 360 | anther-specific proline-rich protein APG precursor [Zea mays] |
| GenBank | EAZ28161.1 | 0 | 62 | 391 | 23 | 354 | hypothetical protein OsJ_12134 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050914.1 | 0 | 62 | 391 | 26 | 357 | Os03g0683800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001142139.1 | 0 | 61 | 391 | 29 | 359 | hypothetical protein LOC100274304 [Zea mays] |
| RefSeq | XP_002466664.1 | 0 | 60 | 391 | 31 | 362 | hypothetical protein SORBIDRAFT_01g011850 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL733949 | 269 | 77 | 345 | 0 |
| EE184109 | 249 | 100 | 348 | 0 |
| DV169469 | 253 | 57 | 309 | 0 |
| FE637588 | 263 | 1 | 261 | 0 |
| FL763087 | 260 | 5 | 262 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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