| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00070327m |
| Family | GH95 |
| Protein Properties | Length: 338 Molecular Weight: 37006.5 Isoelectric Point: 5.0311 |
| Chromosome | Chromosome/Scaffold: 0329449 Start: 92 End: 1279 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH95 | 1 | 338 | 0 |
| DTLWTGAPGNYTDPEAPAALAVVRELVNQGRFADATEAATHLFGGQSEVYQPLGDINLEFGASSQAYDSYKRELDLHTATVLVTYNIGEVRYMREHFCLN PHQVIVTKISANIPGQVSCTMSLSSRLKNTVTVTNANELVMEGICPSQRPSLRKGNSTDVSEIKFAAVLGLQIGGNTAKATVVNGQQLRLDNADCWVVLV VAASSSFNGPFVNPADSELDPTSIALNTLNLTRNLTYDQLKAAHLDDYQHLFYRLTIQLSRGSKDAHSLLTEKERPNEVGGEIRTSADRVKSFSIDEDPS LVELLFQYGRYLLISCSRPGTQVSNLQGIWNQDVAPAW | |||
| Full Sequence |
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| Protein Sequence Length: 338 Download |
| DTLWTGAPGN YTDPEAPAAL AVVRELVNQG RFADATEAAT HLFGGQSEVY QPLGDINLEF 60 GASSQAYDSY KRELDLHTAT VLVTYNIGEV RYMREHFCLN PHQVIVTKIS ANIPGQVSCT 120 MSLSSRLKNT VTVTNANELV MEGICPSQRP SLRKGNSTDV SEIKFAAVLG LQIGGNTAKA 180 TVVNGQQLRL DNADCWVVLV VAASSSFNGP FVNPADSELD PTSIALNTLN LTRNLTYDQL 240 KAAHLDDYQH LFYRLTIQLS RGSKDAHSLL TEKERPNEVG GEIRTSADRV KSFSIDEDPS 300 LVELLFQYGR YLLISCSRPG TQVSNLQGIW NQDVAPAW |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG66022.1 | 0 | 1 | 338 | 62 | 392 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABG66023.1 | 0 | 48 | 338 | 2 | 285 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC79728.1 | 0 | 1 | 338 | 62 | 392 | hypothetical protein OsI_21058 [Oryza sativa Indica Group] |
| RefSeq | NP_001064381.1 | 0 | 1 | 338 | 75 | 432 | Os10g0339600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461732.1 | 0 | 1 | 338 | 88 | 456 | hypothetical protein SORBIDRAFT_02g007180 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 1 | 338 | 43 | 365 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 1 | 338 | 43 | 365 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2ead_B | 4e-21 | 1 | 330 | 77 | 401 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 2ead_A | 4e-21 | 1 | 330 | 77 | 401 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 2eac_B | 5e-21 | 1 | 330 | 77 | 401 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CB634370 | 264 | 50 | 313 | 0 |
| DY275135 | 330 | 1 | 328 | 0 |
| CB684831 | 256 | 12 | 266 | 0 |
| CJ667959 | 253 | 11 | 263 | 0 |
| DN551718 | 272 | 84 | 338 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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