Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00070373m |
Family | GT14 |
Protein Properties | Length: 473 Molecular Weight: 52986.4 Isoelectric Point: 6.6773 |
Chromosome | Chromosome/Scaffold: 033242 Start: 997 End: 4835 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 109 | 365 | 0 |
IAYLLEGTKGDGLRMRRTLQAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDPMFSQVGNVRVIAKGNLVTYKGPTMVACTLHAVAILLKEGLDWDWFIN LSASDYPLMTQDDILHVFSSLPRNLNFIEHFQLSGWKVNIRAKPIVLDPGLYLLKKFDLTMTTERRELPTSFKLYTGSAWIMLTKSFLEYCIWGWDNLPR NLLMYYVNFISSPEGYFHTVICNSNDFRGTAVSHDLHYIAWDYPPKQHPLILSMKDF |
Full Sequence |
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Protein Sequence Length: 473 Download |
MRKNWGLSSG PARPFGDRRW LLPFLASLLV TATLLLAAAY GLFSPPYPGG GGDAALFDAV 60 SLADWDDGAR SVEAGIRDRL LGGDAAADDE NPDDAAVNSD DSDAEPPRIA YLLEGTKGDG 120 LRMRRTLQAI YHPRNQYILH LDLEAPPRER IDLAMYVKGD PMFSQVGNVR VIAKGNLVTY 180 KGPTMVACTL HAVAILLKEG LDWDWFINLS ASDYPLMTQD DILHVFSSLP RNLNFIEHFQ 240 LSGWKVNIRA KPIVLDPGLY LLKKFDLTMT TERRELPTSF KLYTGSAWIM LTKSFLEYCI 300 WGWDNLPRNL LMYYVNFISS PEGYFHTVIC NSNDFRGTAV SHDLHYIAWD YPPKQHPLIL 360 SMKDFNKMVK SGAPFARKFP KDDKVLDKID RELLHRSEGR FTPGAWCDGS SEGGADPCLS 420 RGEDSVFEPG PGAERLRGLM KKVLSWDYRN GSCSSLAYDQ TKRDWYVPKS KG* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-80 | 109 | 369 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 107 | 444 | 338 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ41491.1 | 0 | 1 | 472 | 1 | 449 | hypothetical protein OsJ_26015 [Oryza sativa Japonica Group] |
RefSeq | NP_001060977.1 | 0 | 1 | 472 | 1 | 466 | Os08g0143500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147601.1 | 0 | 1 | 472 | 1 | 482 | xylosyltransferase 2 [Zea mays] |
RefSeq | XP_002443840.1 | 0 | 1 | 472 | 1 | 432 | hypothetical protein SORBIDRAFT_07g003140 [Sorghum bicolor] |
RefSeq | XP_002517977.1 | 0 | 1 | 454 | 7 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000001 | 125 | 375 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000001 | 125 | 375 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000001 | 125 | 375 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000001 | 125 | 375 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000003 | 125 | 375 | 101 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |