Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00070433m |
Family | GH27 |
Protein Properties | Length: 369 Molecular Weight: 40291.8 Isoelectric Point: 4.3875 |
Chromosome | Chromosome/Scaffold: 033197 Start: 700 End: 4046 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 110 | 303 | 0 |
MPGSLGYEEEDAKTFASWGVDYLKYDNCNDQGLSPQPRYINMSKALLNSGRDIFFSLCEWGVDDPATWASGVGNSWRTTGDIQDNWASMTAIADTNDKWA SYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALTKAPLLIGCDIRSMSNNTKEILSNQNVIAVNQDELGVQGHKVQQDGDQEVWAGPLSGGR |
Full Sequence |
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Protein Sequence Length: 369 Download |
MEEKAPFRAL LFLLLSTWNS WNHFACNINE DIIRQIADAM VDSGLAKLGY DYINIDDCWA 60 AYDRDSQGNL VANPSTFPSG IKVLADYVHG KGLKLGVYGD AGSRTCSNKM PGSLGYEEED 120 AKTFASWGVD YLKYDNCNDQ GLSPQPRYIN MSKALLNSGR DIFFSLCEWG VDDPATWASG 180 VGNSWRTTGD IQDNWASMTA IADTNDKWAS YAGPGGWNDP DMLEVGNGGM TTEEYRSHFS 240 IWALTKAPLL IGCDIRSMSN NTKEILSNQN VIAVNQDELG VQGHKVQQDG DQEVWAGPLS 300 GGRVAVVLWN RGSAEASITA NWSSIGLNAS TVVDAHNLWT NEVTSSVQGE LKETVDTHAC 360 KMYVLTPK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 9.0e-24 | 18 | 280 | 349 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 5.0e-27 | 18 | 252 | 302 | + Melibiase. | ||
PLN02692 | PLN02692 | 1.0e-180 | 18 | 367 | 351 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 18 | 368 | 351 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 18 | 367 | 354 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC66445.1 | 0 | 18 | 368 | 78 | 428 | alpha-galactosidase [Helianthus annuus] |
EMBL | CAN66885.1 | 0 | 18 | 368 | 42 | 392 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268711.1 | 0 | 18 | 368 | 59 | 409 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331416.1 | 0 | 18 | 368 | 17 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525666.1 | 0 | 18 | 367 | 63 | 413 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 18 | 367 | 13 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 18 | 362 | 13 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 18 | 368 | 13 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 18 | 368 | 13 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 18 | 311 | 13 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |