y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00070548m |
Family | GT37 |
Protein Properties | Length: 578 Molecular Weight: 65097.4 Isoelectric Point: 7.8136 |
Chromosome | Chromosome/Scaffold: 033391 Start: 1210 End: 3992 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 97 | 546 | 0 |
TMESSKLQSDKLIGGLLAPGFDEQSCLSRYQSALYRKESPHLLSTYLLERLREHEVLQKKCGPHTESYKKAIEQLKSGQDIEVGDCTYLVWISYSGLGNR ILTITSAFVYAILTSRVLLVDGDKGTADLFCEPFPETSWLLPSDFPVNLFKNLNIGSPESYGKMLKTANIHSDGSFKGPTPAFIYLHLAHDYDDYDKHFF CEHSQQHLQRIPWLILRSDNYFVPSLFLIPAYQEELMRLFPQKDAVFHHLGRYLFHPTNAVWGLITRYYDSYLARADEKLGIQIRVFDTETGPFQHVLDQ VLSCTLKENLLPEVNAQQPIVSARKVRSKVVLITSLNSGYYERIRTMYWEHPTSNGEIISFHQPSHEEHQDSDKKMHNMKAWAEIYLLSLSDVMVTSAWS TFGYVAQGLSGLKTWLMFKPENHTAPNPPCRQVMSMEPCFHAPPFYDCKA |
Full Sequence |
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Protein Sequence Length: 578 Download |
MDIKERIRRS PPPPPTPQAA APAPGHPRGR KGRVAVLPLS VAALVACVVL LLLLSGGSAA 60 RRGGQFLDAD PATARRPSGD GRGGLHQPRP RDGGHGTMES SKLQSDKLIG GLLAPGFDEQ 120 SCLSRYQSAL YRKESPHLLS TYLLERLREH EVLQKKCGPH TESYKKAIEQ LKSGQDIEVG 180 DCTYLVWISY SGLGNRILTI TSAFVYAILT SRVLLVDGDK GTADLFCEPF PETSWLLPSD 240 FPVNLFKNLN IGSPESYGKM LKTANIHSDG SFKGPTPAFI YLHLAHDYDD YDKHFFCEHS 300 QQHLQRIPWL ILRSDNYFVP SLFLIPAYQE ELMRLFPQKD AVFHHLGRYL FHPTNAVWGL 360 ITRYYDSYLA RADEKLGIQI RVFDTETGPF QHVLDQVLSC TLKENLLPEV NAQQPIVSAR 420 KVRSKVVLIT SLNSGYYERI RTMYWEHPTS NGEIISFHQP SHEEHQDSDK KMHNMKAWAE 480 IYLLSLSDVM VTSAWSTFGY VAQGLSGLKT WLMFKPENHT APNPPCRQVM SMEPCFHAPP 540 FYDCKARRGT DTGKLVPHVR HCEDMSWGLK LVDTDEW* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.001 | 191 | 269 | 88 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 87 | 546 | 462 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD17113.1 | 0 | 1 | 577 | 1 | 572 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
GenBank | EAY87645.1 | 0 | 1 | 559 | 1 | 554 | hypothetical protein OsI_09054 [Oryza sativa Indica Group] |
GenBank | EEE57856.1 | 0 | 1 | 559 | 1 | 508 | hypothetical protein OsJ_08492 [Oryza sativa Japonica Group] |
RefSeq | NP_001048215.1 | 0 | 7 | 577 | 1 | 566 | Os02g0764400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452879.1 | 0 | 1 | 576 | 3 | 579 | hypothetical protein SORBIDRAFT_04g034120 [Sorghum bicolor] |