Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00070574m |
Family | GH9 |
Protein Properties | Length: 506 Molecular Weight: 54913 Isoelectric Point: 8.2061 |
Chromosome | Chromosome/Scaffold: 033611 Start: 2961 End: 6263 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 34 | 491 | 0 |
DYGDALHKCILFFEGQRSGRLPPDQRVRWRRDSGLHDGAAAGVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGPHKEEARKAVRWATDYLMK ATARPNTVYVQVGDAFRDHACWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAASIVFRDSDPAYSKRLLDRAVAVFAFADKHRGPYSSSLHAAVCP CYCDYSGYQDELLWGAAWLHKASRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYS PGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPAQLRRVAKRQVGYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIG CKAGAAYYASPAPNPNLLVGAVVGGPSDASDAFPDARAVFEQSEPTTYINAPLMGLLA |
Full Sequence |
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Protein Sequence Length: 506 Download |
MPAAPRSVKE MAAAEVVLAA MLLSSAAVAA AQHDYGDALH KCILFFEGQR SGRLPPDQRV 60 RWRRDSGLHD GAAAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG RSFGPHKEEA 120 RKAVRWATDY LMKATARPNT VYVQVGDAFR DHACWERPED MDTPRTVYKV DPSHPGSDVA 180 AETAAALAAA SIVFRDSDPA YSKRLLDRAV AVFAFADKHR GPYSSSLHAA VCPCYCDYSG 240 YQDELLWGAA WLHKASRRRE YREYIKRNEV VLGASDAINE FGWDNKHAGI NVLISKEVLM 300 GKDEYFQSFR VNADNFMCTL LPGISNHPQI QYSPGGLLFK VGSSNMQHVT QLSFLLLAYS 360 NYLSHAGGRV SCGSSSASPA QLRRVAKRQV GYILGDNPLR MSYMVGYGAR FPRRIHHRAS 420 SLPSVAAHPA RIGCKAGAAY YASPAPNPNL LVGAVVGGPS DASDAFPDAR AVFEQSEPTT 480 YINAPLMGLL AYFSAHPNPA ESGGD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 32 | 500 | 469 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 33 | 496 | 464 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 32 | 500 | 472 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 34 | 491 | 470 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 34 | 491 | 462 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ00403.1 | 0 | 11 | 502 | 1 | 492 | hypothetical protein OsI_22418 [Oryza sativa Indica Group] |
RefSeq | NP_001048033.1 | 0 | 33 | 505 | 35 | 508 | Os02g0733300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001057318.1 | 0 | 11 | 502 | 1 | 492 | Os06g0256900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131617.2 | 0 | 32 | 505 | 33 | 506 | hypothetical protein LOC100192969 [Zea mays] |
RefSeq | XP_002454331.1 | 0 | 1 | 505 | 1 | 504 | hypothetical protein SORBIDRAFT_04g028790 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 33 | 491 | 3 | 426 | V Chain V, Crystallographic Structure Of A Putative Chlorite Dismutase |
PDB | 1ksc_A | 0 | 33 | 491 | 3 | 426 | V Chain V, Crystallographic Structure Of A Putative Chlorite Dismutase |
PDB | 1ks8_A | 0 | 33 | 491 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 34 | 491 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 34 | 491 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |