Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00070799m |
Family | GH17 |
Protein Properties | Length: 295 Molecular Weight: 30665.1 Isoelectric Point: 10.2048 |
Chromosome | Chromosome/Scaffold: 0331401 Start: 24 End: 913 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 292 | 0 |
MVGNDLPPPTAVVKLYKSLGINRMRIYAPDTHVLGALRGSGIRLVLGVANEDLAANRASAASWVRANVKPYNPAVRIAYVAAGNEVQGGAARSILPAMRN LAAALAAAGLAGVKVSTCVRLDVVASSFPPSGGVFAQPYMADIARFLAAAGAPLLANVYPYFAYKEDPRSISLGYATFRPGTTVRDAGNGLVYTNLLDAM VDSVVAARGAVVVSESGWPSAGGFAASVENARAYNQGVVEHSGKGKGTPKRPGAALEAYVFAMFNENQKPGDPTEKSFGLFHPNKSAVSPIR |
Full Sequence |
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Protein Sequence Length: 295 Download |
MVGNDLPPPT AVVKLYKSLG INRMRIYAPD THVLGALRGS GIRLVLGVAN EDLAANRASA 60 ASWVRANVKP YNPAVRIAYV AAGNEVQGGA ARSILPAMRN LAAALAAAGL AGVKVSTCVR 120 LDVVASSFPP SGGVFAQPYM ADIARFLAAA GAPLLANVYP YFAYKEDPRS ISLGYATFRP 180 GTTVRDAGNG LVYTNLLDAM VDSVVAARGA VVVSESGWPS AGGFAASVEN ARAYNQGVVE 240 HSGKGKGTPK RPGAALEAYV FAMFNENQKP GDPTEKSFGL FHPNKSAVSP IRFR* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 8.0e-115 | 1 | 293 | 308 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL35900.1 | 0 | 1 | 293 | 36 | 334 | AF443600_1 endo-1,3-beta-glucanase [Oryza sativa] |
GenBank | EAY77183.1 | 0 | 1 | 293 | 36 | 334 | hypothetical protein OsI_05153 [Oryza sativa Indica Group] |
GenBank | EAY77204.1 | 0 | 3 | 293 | 36 | 334 | hypothetical protein OsI_05173 [Oryza sativa Indica Group] |
RefSeq | NP_001045372.1 | 0 | 1 | 293 | 36 | 334 | Os01g0944700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002459077.1 | 0 | 1 | 293 | 36 | 336 | hypothetical protein SORBIDRAFT_03g045490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 1 | 293 | 7 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 293 | 7 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 1 | 293 | 7 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 1 | 285 | 8 | 307 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 1 | 285 | 8 | 307 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR739897 | 302 | 1 | 291 | 0 |
DR739798 | 301 | 1 | 290 | 0 |
HX143290 | 244 | 59 | 295 | 0 |
DR735700 | 287 | 1 | 276 | 0 |
FL764193 | 269 | 12 | 265 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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