| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00070843m |
| Family | GT31 |
| Protein Properties | Length: 230 Molecular Weight: 26990.2 Isoelectric Point: 5.3246 |
| Chromosome | Chromosome/Scaffold: 033690 Start: 1429 End: 2118 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT31 | 6 | 152 | 1.5e-24 |
| HVDVRFVLCAVDKEEDRILVALEVIAHGDILVLNCTENMNDGMTYAYFFAVPRLFADRPYDYVGKTDDDTYYRLASLAESLRGKARRDAYHGYLTPCHWL PEKQYMSGMGYIVSWDVAAWIAETPELRDDHDDWEDVNFGGWLRKGG | |||
| Full Sequence |
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| Protein Sequence Length: 230 Download |
| STDHFHVDVR FVLCAVDKEE DRILVALEVI AHGDILVLNC TENMNDGMTY AYFFAVPRLF 60 ADRPYDYVGK TDDDTYYRLA SLAESLRGKA RRDAYHGYLT PCHWLPEKQY MSGMGYIVSW 120 DVAAWIAETP ELRDDHDDWE DVNFGGWLRK GGRYKNVYNE EPRMYDYWDR EMDADINCFR 180 HEHRADAVAV HKLKDRLKWA RTLHFFNATQ GLAPSNMYHL DLDNNIYRV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03133 | PLN03133 | 0.002 | 67 | 160 | 127 | + beta-1,3-galactosyltransferase; Provisional | ||
| pfam01762 | Galactosyl_T | 1.0e-5 | 5 | 139 | 163 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD19198.1 | 0 | 7 | 226 | 90 | 313 | hypothetical protein [Oryza sativa Japonica Group] |
| DDBJ | BAD19304.1 | 0 | 7 | 222 | 92 | 307 | hypothetical protein [Oryza sativa Japonica Group] |
| DDBJ | BAD19307.1 | 0 | 7 | 221 | 92 | 306 | hypothetical protein [Oryza sativa Japonica Group] |
| RefSeq | NP_001136849.1 | 0 | 7 | 229 | 108 | 331 | hypothetical protein LOC100217000 [Zea mays] |
| RefSeq | XP_002454671.1 | 0 | 7 | 229 | 118 | 337 | hypothetical protein SORBIDRAFT_04g035250 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV512644 | 217 | 16 | 230 | 0 |
| EG402531 | 217 | 6 | 220 | 0 |
| HX183513 | 217 | 6 | 220 | 0 |
| HX165149 | 216 | 7 | 220 | 0 |
| FF350909 | 217 | 6 | 220 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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