Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.001G140600.1 |
Family | CE8 |
Protein Properties | Length: 395 Molecular Weight: 42945.3 Isoelectric Point: 7.1098 |
Chromosome | Chromosome/Scaffold: 01 Start: 38894416 End: 38896314 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 94 | 386 | 0 |
CVDRRGCCNFTTVQAAVNAVPDFSVKRTIIWINIGMYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTALSANGTFYSGSVQVFASNFIAKNISFMNLAPM PSPGAVGAQAVAIRVSGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQIVSIANPVPVGQRSINGAVTAHGRVSGDENTGF AFVNCTIGGNGRIWLGRAWRPYSRVVFASTLMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGSGANTNLRASYVQKLNETEASAFFNTTFIDG |
Full Sequence |
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Protein Sequence Length: 395 Download |
MGPQSNLLSL LVALAAVFAY LYLINPIPQF LINPISQDLI NALSPSSAYL AKPLTGNFHR 60 HHKKHPSGGN TDSICDDFPS GIPPPNTNTT SYLCVDRRGC CNFTTVQAAV NAVPDFSVKR 120 TIIWINIGMY YEKVMVPKTK PNITFQGQGY TSTAIAWNDT ALSANGTFYS GSVQVFASNF 180 IAKNISFMNL APMPSPGAVG AQAVAIRVSG DQSEFRGCGF FGAQDTLHDD KGRHYFKDCY 240 IQGSIDFIFG NARSLYENCQ IVSIANPVPV GQRSINGAVT AHGRVSGDEN TGFAFVNCTI 300 GGNGRIWLGR AWRPYSRVVF ASTLMSDIIA PEGWNDFNDP SRDQTIFYGE YNCSGSGANT 360 NLRASYVQKL NETEASAFFN TTFIDGDQWL ETSK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 1.0e-95 | 87 | 390 | 312 | + pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-105 | 95 | 390 | 297 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 2.0e-105 | 43 | 390 | 358 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-124 | 93 | 392 | 307 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 57 | 393 | 337 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08648.1 | 0 | 5 | 392 | 6 | 389 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_172023.1 | 0 | 73 | 393 | 71 | 391 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002267842.1 | 0 | 7 | 391 | 10 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323171.1 | 0 | 64 | 392 | 49 | 377 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521065.1 | 0 | 66 | 392 | 67 | 393 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 93 | 393 | 9 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.99993e-41 | 94 | 393 | 6 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-17 | 102 | 361 | 43 | 338 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.000000000000003 | 103 | 358 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000003 | 103 | 358 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |