Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.001G183100.1 |
Family | CE8 |
Protein Properties | Length: 417 Molecular Weight: 46359.8 Isoelectric Point: 6.7287 |
Chromosome | Chromosome/Scaffold: 01 Start: 44781655 End: 44786519 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 110 | 398 | 0 |
TVDLKGCANFSSVQKAVDAVPESSSDTTLIIIDSGTYREKVVVQGNKTNLIIQGQGYLNTIVEWNDTANSTGGTSYSYSFAIFASMFTAYNISFKNTAPP PSPGVVGAQAVALRVTGDKAAFYGCGFYGAQDTLNDDGGRHYFKECLIQGSIDFIFGNARSLYEDCTINCVAKEEKDEISGSITAQGRKSMDEESGFSFV NCSIVGSGRVWLGRAWGPYATVIFSTTYMSDVIAPEGWNDWRDPSRDQSVFFGEYRCHGPGANYESRVSYAKQLRDNEANSYMDISYID |
Full Sequence |
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Protein Sequence Length: 417 Download |
MMGFNRNLFW LSGFVIFLFY ISFVLYSTSP SPSNNTAISP QDSFSFQLGI FSKIIKLSGA 60 QDLVSLITSI ARRRHRHHHH HHRGRHKEKC DGAKWDSRLI QHYNVSLVFT VDLKGCANFS 120 SVQKAVDAVP ESSSDTTLII IDSGTYREKV VVQGNKTNLI IQGQGYLNTI VEWNDTANST 180 GGTSYSYSFA IFASMFTAYN ISFKNTAPPP SPGVVGAQAV ALRVTGDKAA FYGCGFYGAQ 240 DTLNDDGGRH YFKECLIQGS IDFIFGNARS LYEDCTINCV AKEEKDEISG SITAQGRKSM 300 DEESGFSFVN CSIVGSGRVW LGRAWGPYAT VIFSTTYMSD VIAPEGWNDW RDPSRDQSVF 360 FGEYRCHGPG ANYESRVSYA KQLRDNEANS YMDISYIDGN DWLLSYPQSY VNPSYI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-92 | 106 | 403 | 298 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-101 | 108 | 407 | 301 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 2.0e-104 | 107 | 403 | 304 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-127 | 105 | 404 | 307 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 7.0e-142 | 104 | 406 | 307 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30191.1 | 0 | 46 | 412 | 40 | 408 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 94 | 403 | 76 | 385 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 108 | 412 | 14 | 318 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 94 | 403 | 3 | 313 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 31 | 412 | 30 | 376 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 7.00005e-41 | 111 | 403 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-39 | 115 | 415 | 11 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-18 | 119 | 407 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-18 | 119 | 407 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-18 | 119 | 407 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |