| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.001G199000.1 |
| Family | AA7 |
| Protein Properties | Length: 557 Molecular Weight: 61324.5 Isoelectric Point: 6.6887 |
| Chromosome | Chromosome/Scaffold: 01 Start: 46490909 End: 46501379 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 133 | 329 | 2.5e-26 |
| NIPDVIVYPRSEEEVSKIVSLCNMHKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKTVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAS IGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGLITEVTLRLQKIPQHSVVAMCNFPSVKDAADVA | |||
| Full Sequence |
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| Protein Sequence Length: 557 Download |
| MSNFSSWLFR LRSSSSKFFY RYRTLHNKYA PTVFNNHSTR NASLTSLLPL ALALSAGSLA 60 LHPHFSPSFC DTERGVNIGG KGSTQFVVKG SHKEFPQELL EELKIICQDN ISVDYDERYI 120 HGKPQNSFHK AVNIPDVIVY PRSEEEVSKI VSLCNMHKVP IVPYGGATSI EGHTLSPHGG 180 VCIDMSLMKT VKALHVDDMD VVVEPGIGWM ELNEYLEPYG LFFPLDPGPG ASIGGMCATR 240 CSGSLAVRYG TMRDNVISLK VVLANGDIVK TASRARKSAA GYDLTRLMIG SEGTLGLITE 300 VTLRLQKIPQ HSVVAMCNFP SVKDAADVAI ATMRSGVQVS RVELLDEVQV KAINIANGKN 360 LPECPTLMFE FIGTEAYARE QTQIVRKLVS EHNGSDFVFA EEPEAKKELW KVRKEALWAC 420 FAMEPNLEAM ISDVCVPLSH LGDLISRSKK ELDASPLVCT VIAHAGDGNF HTVILFDPSQ 480 EEQRREAERL NQFMVYAALS FEGTCTGEHG VGTGKMKYLE EELGVEALRT MKKIKSVLDP 540 NNIMNPGKLI PPHICF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 3.0e-48 | 134 | 555 | 430 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 4.0e-70 | 308 | 549 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 6.0e-91 | 138 | 548 | 419 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 2.0e-122 | 104 | 552 | 462 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 66 | 556 | 492 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 70 | 556 | 69 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 45 | 556 | 51 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 4 | 556 | 3 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 78 | 556 | 1 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 4 | 556 | 3 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 1.00053e-42 | 137 | 550 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 1.00053e-42 | 137 | 550 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 1.00053e-42 | 137 | 550 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 1.00053e-42 | 137 | 550 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 1.00053e-42 | 137 | 550 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX265038 | 323 | 149 | 470 | 0 |
| HO783793 | 191 | 171 | 361 | 0 |
| HO783793 | 103 | 62 | 164 | 0 |
| HO783793 | 130 | 358 | 487 | 0 |
| HO783793 | 26 | 158 | 183 | 0.009 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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