Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.001G268000.1 |
Family | CBM43 |
Protein Properties | Length: 190 Molecular Weight: 19366.8 Isoelectric Point: 4.2484 |
Chromosome | Chromosome/Scaffold: 01 Start: 52002991 End: 52005129 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 28 | 112 | 1.5e-32 |
WCVAKIGVSEEALQRALDSACGGGDGGADCAPIQPNGLCFTPNTLQAHASYAFNSFYQRNARASNACLFNGASTVAQTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 190 Download |
MGMVVAVTVT VTVTVTAMVM EMVGGGSWCV AKIGVSEEAL QRALDSACGG GDGGADCAPI 60 QPNGLCFTPN TLQAHASYAF NSFYQRNARA SNACLFNGAS TVAQTDPSYG SCVYPSSSAV 120 ATPTASTAEV TNTTAPTPSS TTTTPIHGRD GAGMDPQIPQ NSTPTSNTMT SFLLFLLILF 180 LGDTFFVAL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-12 | 27 | 101 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-27 | 27 | 114 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14573.1 | 0 | 22 | 181 | 22 | 190 | unknown [Glycine max] |
GenBank | ACU17645.1 | 1.99965e-42 | 5 | 181 | 7 | 189 | unknown [Glycine max] |
RefSeq | NP_193096.5 | 2e-40 | 28 | 157 | 61 | 197 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 1e-39 | 24 | 189 | 46 | 210 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002452133.1 | 2e-36 | 25 | 144 | 35 | 153 | hypothetical protein SORBIDRAFT_04g020230 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-24 | 26 | 118 | 11 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |