Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.002G124600.1 |
Family | GT4 |
Protein Properties | Length: 488 Molecular Weight: 54879 Isoelectric Point: 8.1079 |
Chromosome | Chromosome/Scaffold: 02 Start: 25088917 End: 25090380 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 307 | 444 | 5.3e-24 |
VLGVAGRLVKDKGHPLLHEAYSRLITKHPNVYLIVAGSGPWENRYRDLGNQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLAS RFPSIKGSVVVDDEFGFMFSPNVESLMEALEAVVKEGK |
Full Sequence |
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Protein Sequence Length: 488 Download |
MAFNNKSKKS SSPSNFTFCV TLFFLVLFTI PAFFLLHTPT TCTTLSKTWS GDLLLAKFAW 60 NKLPFLEHNP SPLPLKIAVF SRKWPIGTTP GGMERHAYTL HTALAQRGHK VHIFTSPPEE 120 ETTSTFSSDT TNHQADVNAP SSPFIHCHEG EPGKWRYNKA WEQFLEQNQK EPFDVVHSES 180 VALPHWLARD LPNLAVSWHG IALESLQSSL FQDLARRTDE PRSPDFDKGL QGVLPKILNE 240 IRFFRNYAHH VAISDSCGEM LRDVYQIPSR RVHVILNGVD EGDFREDVEL GREFRTKIGI 300 PSNASLVLGV AGRLVKDKGH PLLHEAYSRL ITKHPNVYLI VAGSGPWENR YRDLGNQVLV 360 LGSMSPSMLR AFYNAIDIFV NPTLRPQGLD LTLMEAMMSG KPLLASRFPS IKGSVVVDDE 420 FGFMFSPNVE SLMEALEAVV KEGKVGLARR GKACREYAIS MFTATKMALA YERLFLCIKE 480 DKFCNYY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0438 | RfaG | 7.0e-30 | 76 | 482 | 416 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
cd03807 | GT1_WbnK_like | 8.0e-33 | 242 | 475 | 243 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
cd03811 | GT1_WabH_like | 1.0e-34 | 91 | 464 | 384 | + This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. | ||
cd03798 | GT1_wlbH_like | 1.0e-40 | 91 | 475 | 399 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03801 | GT1_YqgM_like | 1.0e-57 | 76 | 475 | 412 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002271072.1 | 0 | 1 | 486 | 1 | 492 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271108.1 | 0 | 1 | 486 | 1 | 491 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303479.1 | 0 | 1 | 487 | 1 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326600.1 | 0 | 1 | 486 | 1 | 487 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519899.1 | 0 | 1 | 486 | 2 | 485 | glycosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3c4v_B | 0.000001 | 91 | 425 | 22 | 353 | A Chain A, Crystal Structure Of N-Terminal Domain Of Human Galectin-8 |
PDB | 3c4v_A | 0.000001 | 91 | 425 | 22 | 353 | A Chain A, Crystal Structure Of N-Terminal Domain Of Human Galectin-8 |
PDB | 3c4q_B | 0.000001 | 91 | 425 | 22 | 353 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
PDB | 3c4q_A | 0.000001 | 91 | 425 | 22 | 353 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
PDB | 3c48_B | 0.000002 | 91 | 425 | 42 | 373 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |