Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.002G196600.1 |
Family | GT5 |
Protein Properties | Length: 990 Molecular Weight: 111563 Isoelectric Point: 6.2632 |
Chromosome | Chromosome/Scaffold: 02 Start: 35363316 End: 35371908 |
Description | starch synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 493 | 977 | 0 |
HVIHITAEMAPVAKVGGLADVVTGLGKALQKKGHLVEIVLPKYDCMQYDRVCNLRALDVLIESHFDGQLYKNKIWVGTVEGLPVYFIEPLHPDKFFWRGE YYGEHDDFKRFSFFSRAALDFLLQTGKKPDIIHCHDWQTAFIAPLYWEIFVNKGLNSARICFTCHNFEYQGTAAASELDSCGLVSKSLNRSDRMQDNSAP HKVNSVKGGIVFSNIVTTVSPTYAQEVRTKEGGHGLDSTLSSHFRKFIGILNGIDTDAWNPASDVFLPVQYNAADLQGKVENKQALRRRLGLSSADVTRP LVGCITRLVPQKGVHLIRHAIYLTLELGGQFVLLGSSPVPSIQKEFESIANKFKNHDHVRLILKYDEPLSHEIYAASDMFIIPSIFEPCGLTQMISMRYG AIPIVRKTGGLNDSVFDVDDDTIPSQFQNGFTFANADEQGLKGALVRALNLYKNNPESWKQLVQKDMNIDFSWGTSAAQYEKLYS |
Full Sequence |
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Protein Sequence Length: 990 Download |
MASKLSTSFV CWNLSGFNCV NRSNGNGRIV RVSFPASCKM RNRSTFSLQN KRQQIKPSTE 60 VGLRQNQVEE EDSVVSFNND DSVDKTKETT APSAININGA EQAEQLSSEQ LEDFLGMIRK 120 AEKNILLLNQ ARVRALKDLE KILVEKDALR GEINVLEIRL AETDAQIKLA TEEKVHVELL 180 EQQLEKLRNE LVEKGSTEAV YEESRDLQNG DLRDAHPLSN KGISHALSKE FNSLRTENAS 240 LKNAIESFKT QFSIVKNNDG RLVALENERS SLESALKDLE SKLCSQEDAS KLSTLTVECK 300 DLWGKVENLQ SLLDKATKQA DQAFIVLQQN QDLRRKVDKL ETSLEEANIY KLSSEKLQNY 360 NELMKQKIKL LEDRLQKSDQ ELNSYVQLYQ NSVKEFQDTL DTLNLKEESK GRTAEEPVED 420 MSWEFWSKLL LLIDGWALEK KISVDDASLL REKVRRRERR ICETFLAYEE ESEHEAVSAF 480 LGLLSSATSP GLHVIHITAE MAPVAKVGGL ADVVTGLGKA LQKKGHLVEI VLPKYDCMQY 540 DRVCNLRALD VLIESHFDGQ LYKNKIWVGT VEGLPVYFIE PLHPDKFFWR GEYYGEHDDF 600 KRFSFFSRAA LDFLLQTGKK PDIIHCHDWQ TAFIAPLYWE IFVNKGLNSA RICFTCHNFE 660 YQGTAAASEL DSCGLVSKSL NRSDRMQDNS APHKVNSVKG GIVFSNIVTT VSPTYAQEVR 720 TKEGGHGLDS TLSSHFRKFI GILNGIDTDA WNPASDVFLP VQYNAADLQG KVENKQALRR 780 RLGLSSADVT RPLVGCITRL VPQKGVHLIR HAIYLTLELG GQFVLLGSSP VPSIQKEFES 840 IANKFKNHDH VRLILKYDEP LSHEIYAASD MFIIPSIFEP CGLTQMISMR YGAIPIVRKT 900 GGLNDSVFDV DDDTIPSQFQ NGFTFANADE QGLKGALVRA LNLYKNNPES WKQLVQKDMN 960 IDFSWGTSAA QYEKLYSMSV ARARAAKRA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 8.0e-158 | 485 | 976 | 499 | + synthase/transferase | ||
PLN02939 | PLN02939 | 0 | 1 | 980 | 1005 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 0 | 492 | 977 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 493 | 976 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
PRK00654 | glgA | 0 | 492 | 976 | 487 | + glycogen synthase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA16796.1 | 0 | 1 | 986 | 1 | 1067 | starch synthase-like protein [Arabidopsis thaliana] |
EMBL | CAB40375.1 | 0 | 117 | 989 | 1 | 874 | starch synthase, isoform V [Vigna unguiculata] |
RefSeq | NP_193558.3 | 0 | 1 | 985 | 1 | 1035 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002274716.1 | 0 | 1 | 986 | 1 | 1008 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298514.1 | 0 | 94 | 986 | 18 | 884 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rzv_B | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 1rzu_A | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3d1j_A | 0 | 492 | 976 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO851132 | 333 | 567 | 899 | 0 |
CB893818 | 281 | 491 | 771 | 0 |
CF828776 | 285 | 618 | 902 | 0 |
GW865616 | 298 | 598 | 895 | 0 |
FE682849 | 228 | 717 | 944 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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